RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 SH3BGRP55822 239 aaPredicted RBP24.83■■□□□ 1.57
COL13A1-213ENST00000520267 STARD3Q14849 445 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 CCNYL2Q5T2Q4 361 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 MED27Q6P2C8 311 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 CRTC3Q6UUV7 619 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 TRMT11Q7Z4G4 463 aaKnown RBP24.83■■□□□ 1.57
COL13A1-213ENST00000520267 ZZZ3Q8IYH5 903 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 DUSP26Q9BV47 211 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 NPLQ9BXD5 320 aaPredicted RBP24.83■■□□□ 1.57
COL13A1-213ENST00000520267 TMEM245Q9H330 911 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 LTB4R2Q9NPC1 389 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 CCNDBP1O95273 360 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 ZNF8P17098 575 aaPredicted RBP24.83■■□□□ 1.57
COL13A1-213ENST00000520267 GPX2P18283 190 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 DCTP40126 519 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 CDK9P50750 372 aaKnown RBP24.83■■□□□ 1.57
COL13A1-213ENST00000520267 DYNC1I2Q13409 638 aaKnown RBP24.83■■□□□ 1.57
COL13A1-213ENST00000520267 SPIDRQ14159 915 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 LRRC23Q53EV4 343 aaPredicted RBP24.83■■□□□ 1.57
COL13A1-213ENST00000520267 GPR155Q7Z3F1 870 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 OR5K1Q8NHB7 308 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 PNPT1Q8TCS8 783 aaKnown RBP24.83■■□□□ 1.57
COL13A1-213ENST00000520267 DDX18Q9NVP1 670 aaKnown RBP24.83■■□□□ 1.57
COL13A1-213ENST00000520267 USE1Q9NZ43 259 aa24.83■■□□□ 1.57
COL13A1-213ENST00000520267 POP7O75817 140 aaKnown RBP24.82■■□□□ 1.56
COL13A1-213ENST00000520267 PRKACGP22612 351 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 DPTQ07507 201 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 RBBP5Q15291 538 aaKnown RBP24.82■■□□□ 1.56
COL13A1-213ENST00000520267 VMACQ2NL98 169 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 MMAAQ8IVH4 418 aaKnown RBP24.82■■□□□ 1.56
COL13A1-213ENST00000520267 YTHDF1Q9BYJ9 559 aaKnown RBP24.82■■□□□ 1.56
COL13A1-213ENST00000520267 FAM118AQ9NWS6 357 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 PCYT1BQ9Y5K3 369 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-213ENST00000520267 ZNF682O95780 498 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 NFE2L1Q14494 772 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 GPR141Q7Z602 305 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 GALNT10Q86SR1 603 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 PTOV1Q86YD1 416 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 CHPFQ8IZ52 775 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 OR9A1PQ8NGU1 263 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 SMARCD2Q92925 531 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 RDH12Q96NR8 316 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 AMBRA1Q9C0C7 1298 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 U3KQV3 271 aa24.82■■□□□ 1.56
COL13A1-213ENST00000520267 C5orf42Q9H799 3197 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 GPM6BQ13491 265 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 GTF2H3Q13889 308 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 MYBPC3Q14896 1274 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 C16orf72Q14CZ0 275 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 EIF4HQ15056 248 aaKnown RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 TMEM52BQ4KMG9 183 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 SPIN4Q56A73 249 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 PDE12Q6L8Q7 609 aaKnown RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 EP400NLQ6ZTU2 488 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 CHST15Q7LFX5 561 aaPredicted RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 C7orf61Q8IZ16 206 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 ALDH16A1Q8IZ83 802 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 EID3Q8N140 333 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 PJA1Q8NG27 643 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 FGF13Q92913 245 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 PPP1R16AQ96I34 528 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 RBM4BQ9BQ04 359 aaKnown RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 DPH2Q9BQC3 489 aaPredicted RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 RBM4Q9BWF3 364 aaKnown RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 SGPP1Q9BX95 441 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 VNN3Q9NY84 501 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 IFT80Q9P2H3 777 aaPredicted RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 SAMD4AQ9UPU9 718 aaKnown RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 DENND4AQ7Z401 1863 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 ASMTP46597 345 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 SLBPQ14493 270 aaKnown RBP eCLIP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 CPTPQ5TA50 214 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 ERN2Q76MJ5 926 aaKnown RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 ZDHHC21Q8IVQ6 265 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 LRRC56Q8IYG6 542 aaPredicted RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 STARD8Q92502 1023 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 LINC00615Q96LM1 132 aaPredicted RBP24.81■■□□□ 1.56
COL13A1-213ENST00000520267 DYRK4Q9NR20 520 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 DYRK1BQ9Y463 629 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 PRKAB1Q9Y478 270 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 PCDHB11Q9Y5F2 797 aa24.81■■□□□ 1.56
COL13A1-213ENST00000520267 E2F6O75461 281 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 CA3P07451 260 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 IDSP22304 550 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 TIA1P31483 386 aaKnown RBP eCLIP24.8■■□□□ 1.56
COL13A1-213ENST00000520267 MAGEA2P43356 314 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 ESRRGP62508 458 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 ZBED5Q49AG3 693 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 CPZQ66K79 652 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 FAM83HQ6ZRV2 1179 aaPredicted RBP24.8■■□□□ 1.56
COL13A1-213ENST00000520267 PLA2G15Q8NCC3 412 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 POP5Q969H6 163 aaKnown RBP24.8■■□□□ 1.56
COL13A1-213ENST00000520267 LIN28AQ9H9Z2 209 aaKnown RBP24.8■■□□□ 1.56
COL13A1-213ENST00000520267 CDH23Q9H251 3354 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 ATG2AQ2TAZ0 1938 aa24.8■■□□□ 1.56
COL13A1-213ENST00000520267 B4GAT1O43505 415 aa24.79■■□□□ 1.56
COL13A1-213ENST00000520267 C1GALT1C1LP0DN25 315 aa24.79■■□□□ 1.56
COL13A1-213ENST00000520267 PIGAP37287 484 aa24.79■■□□□ 1.56
COL13A1-213ENST00000520267 TAP2Q03519 686 aa24.79■■□□□ 1.56
COL13A1-213ENST00000520267 FAM109BQ6ICB4 259 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms