RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 WNT9AO14904 365 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 AREL1O15033 823 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SLC16A6O15403 523 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SMAD6O43541 496 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 MRPS14O60783 128 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 STK16O75716 305 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 AP2A2O94973 939 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 CLDN9O95484 217 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 KRT6AP02538 564 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 KRT6BP04259 564 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SEMG1P04279 462 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 ANXA5P08758 320 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 ALPIP09923 528 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SPATA31D3P0C874 917 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 ITGAMP11215 1152 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 MTHFD1P11586 935 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 NCF1P14598 390 aaPredicted RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 TCF3P15923 654 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 RPL17P18621 184 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 LAG3P18627 525 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 UGT1A6P19224 532 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 AOAHP28039 575 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 PCSK6P29122 969 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 PTPN6P29350 595 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SERPINA4P29622 427 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 AKT1P31749 480 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 KIR3DL1P43629 444 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 KRT6CP48668 564 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 HSPA7P48741 367 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 AP1S2P56377 157 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SNRPD1P62314 119 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 ESRRGP62508 458 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 HPCAP84074 193 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 B4GALNT1Q00973 533 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 PLOD1Q02809 727 aaPredicted RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 CHRNB3Q05901 458 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 CYP4F3Q08477 520 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 ABHD18Q0P651 414 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 TWF1Q12792 350 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 LMAN2Q12907 356 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 ABRQ12979 859 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 TOP3AQ13472 1001 aaPredicted RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 IL18R1Q13478 541 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 DCTN2Q13561 401 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 CDH18Q13634 790 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SELPLGQ14242 412 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 DMC1Q14565 340 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 ARHGEF6Q15052 776 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 CHRNA6Q15825 494 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 CCDC85BQ15834 202 aaPredicted RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 PHKG1Q16816 387 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 DPY19L1Q2PZI1 675 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 RFX4Q33E94 735 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 RFTN2Q52LD8 501 aaPredicted RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 FAM98BQ52LJ0 330 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 PYCR3Q53H96 274 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 FBXO48Q5FWF7 155 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 ATXN7L2Q5T6C5 722 aaPredicted RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 TTC23Q5W5X9 447 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 TTC33Q6PID6 262 aaPredicted RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 ZNF773Q6PK81 442 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 TBPL2Q6SJ96 375 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 CRTC1Q6UUV9 634 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SUSD1Q6UWL2 747 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 FAM151BQ6UXP7 276 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 LINGO4Q6UY18 593 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 LINC00299Q6ZSB3 139 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SPATA31D4Q6ZUB0 917 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 TTLL10Q6ZVT0 673 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 RTL10Q7L3V2 364 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 LPCAT2Q7L5N7 544 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 GPR141Q7Z602 305 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 KIAA0907Q7Z7F0 614 aaPredicted RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 MICU2Q8IYU8 434 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 APCDD1Q8J025 514 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 EID3Q8N140 333 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 KIAA1958Q8N8K9 716 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 OR2T12Q8NG77 320 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 OR2AP1Q8NGE2 309 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 OR13F1Q8NGS4 319 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 HCAR2Q8TDS4 363 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SLC22A17Q8WUG5 538 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 HDAC2Q92769 488 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 TMIGD2Q96BF3 282 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 ISOC1Q96CN7 298 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 CMTM7Q96FZ5 175 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 REXO5Q96IC2 774 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 ZNF558Q96NG5 402 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 C1orf50Q9BV19 199 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 BOCQ9BWV1 1114 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SPATA9Q9BWV2 254 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 KRTAP17-1Q9BYP8 105 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 DPY30Q9C005 99 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 RNF32Q9H0A6 362 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 IRF2BPLQ9H1B7 796 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 KAT8Q9H7Z6 458 aaKnown RBP4.9□□□□□ -1.63
SDC2-204ENST00000519914 TMEM165Q9HC07 324 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 PREBQ9HCU5 417 aa4.9□□□□□ -1.63
SDC2-204ENST00000519914 SERHLQ9NQF3 203 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms