RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 KIF1CO43896 1103 aaKnown RBP13.57□□□□□ -0.24
SDC2-203ENST00000519587 DKK1O94907 266 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 HGFP14210 728 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 JUPP14923 745 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 ST6GAL1P15907 406 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 TSPAN8P19075 237 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 HMOX2P30519 316 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 CSTF2P33240 577 aaKnown RBP eCLIP13.57□□□□□ -0.24
SDC2-203ENST00000519587 SLC1A6P48664 564 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 CSNK1G2P78368 415 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 INSM1Q01101 510 aaPredicted RBP13.57□□□□□ -0.24
SDC2-203ENST00000519587 DOC2AQ14183 400 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 ARL13AQ5H913 290 aaPredicted RBP13.57□□□□□ -0.24
SDC2-203ENST00000519587 CATSPEREQ5SY80 951 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 MED27Q6P2C8 311 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 TMIGD1Q6UXZ0 262 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 CUZD1Q86UP6 607 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 PAQR7Q86WK9 346 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 SLITRK4Q8IW52 837 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 FAM20CQ8IXL6 584 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 OR4K1Q8NGD4 311 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 AGAP11Q8TF27 550 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 KLHL6Q8WZ60 621 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 ZNF75CPQ92670 426 aaPredicted RBP13.57□□□□□ -0.24
SDC2-203ENST00000519587 N4BP2L2Q92802 583 aaPredicted RBP13.57□□□□□ -0.24
SDC2-203ENST00000519587 RERGQ96A58 199 aaPredicted RBP13.57□□□□□ -0.24
SDC2-203ENST00000519587 THAP11Q96EK4 314 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 SEC16BQ96JE7 1060 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 SLC41A2Q96JW4 573 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 PRAP1Q96NZ9 151 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 ZFYVE21Q9BQ24 234 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 KLHL25Q9H0H3 589 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 NT5DC2Q9H857 520 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 ACSS2Q9NR19 701 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 GEMIN8Q9NWZ8 242 aaKnown RBP13.57□□□□□ -0.24
SDC2-203ENST00000519587 SNX6Q9UNH7 406 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 PCDHGA11Q9Y5H2 935 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 COL27A1Q8IZC6 1860 aaPredicted RBP13.57□□□□□ -0.24
SDC2-203ENST00000519587 MDC1Q14676 2089 aaKnown RBP13.56□□□□□ -0.24
SDC2-203ENST00000519587 IGKV1-8A0A0C4DH67 115 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 A8MU76 341 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 WFS1O76024 890 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 KCNK5O95279 499 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 KRT6AP02538 564 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 KRT6BP04259 564 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 CHRNGP07510 517 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 NELFEP18615 380 aaKnown RBP13.56□□□□□ -0.24
SDC2-203ENST00000519587 MPSTP25325 297 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 VARSP26640 1264 aaKnown RBP13.56□□□□□ -0.24
SDC2-203ENST00000519587 MDH1P40925 334 aaKnown RBP13.56□□□□□ -0.24
SDC2-203ENST00000519587 LSSP48449 732 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 KRT6CP48668 564 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 SEPHS1P49903 392 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 ZFP36L1Q07352 338 aaKnown RBP13.56□□□□□ -0.24
SDC2-203ENST00000519587 IFT88Q13099 833 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 E2F2Q14209 437 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 HES3Q5TGS1 186 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 CDCP2Q5VXM1 449 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 TTC19Q6DKK2 380 aaPredicted RBP13.56□□□□□ -0.24
SDC2-203ENST00000519587 LETMD1Q6P1Q0 360 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 DHRS13Q6UX07 377 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 RGS9BPQ6ZS82 235 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 RNF44Q7L0R7 432 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 TMPRSS9Q7Z410 1059 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 SYVN1Q86TM6 617 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 FAM129CQ86XR2 697 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 ZNF655Q8N720 491 aaPredicted RBP13.56□□□□□ -0.24
SDC2-203ENST00000519587 AGBL5Q8NDL9 886 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 OR4F6Q8NGB9 312 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 PPM1MQ96MI6 270 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 ILKAPQ9H0C8 392 aaPredicted RBP13.56□□□□□ -0.24
SDC2-203ENST00000519587 PFDN4Q9NQP4 134 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 FAM53CQ9NYF3 392 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 ADGRE2Q9UHX3 823 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 CLCA2Q9UQC9 943 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.56□□□□□ -0.24
SDC2-203ENST00000519587 KLHL20Q9Y2M5 609 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 RAP2CQ9Y3L5 183 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 FRYQ5TBA9 3013 aa13.56□□□□□ -0.24
SDC2-203ENST00000519587 H0YIV9 168 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 HAT1O14929 419 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 OR1F1O43749 312 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 SNNO75324 88 aaPredicted RBP13.55□□□□□ -0.24
SDC2-203ENST00000519587 CSO75390 466 aaKnown RBP13.55□□□□□ -0.24
SDC2-203ENST00000519587 OR4F21O95013 312 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 MT-CO3P00414 261 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 MSL3P1P0C860 447 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 UROSP10746 265 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 AHRP35869 848 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 ERVPABLB-1P60509 514 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 YBX1P67809 324 aaKnown RBP13.55□□□□□ -0.24
SDC2-203ENST00000519587 GUCY1A3Q02108 690 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 ACY1Q03154 408 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 ZNF33BQ06732 778 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 CYP4F3Q08477 520 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 CPSF6Q16630 551 aaKnown RBP eCLIP13.55□□□□□ -0.24
SDC2-203ENST00000519587 SH2D4BQ5SQS7 431 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 FCRL6Q6DN72 434 aa13.55□□□□□ -0.24
SDC2-203ENST00000519587 ZNF574Q6ZN55 896 aaPredicted RBP13.55□□□□□ -0.24
SDC2-203ENST00000519587 ARHGAP22Q7Z5H3 698 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms