RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 TBL1XO60907 577 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 WBP4O75554 376 aaKnown RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 PBLDP30039 288 aaPredicted RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 RPL34P49207 117 aaKnown RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 ISL1P61371 349 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 SLC14A2Q15849 920 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 CAPN13Q6MZZ7 669 aaPredicted RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 METTL2BQ6P1Q9 378 aaKnown RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 DSG4Q86SJ6 1040 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 PARP16Q8N5Y8 322 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 GDPD1Q8N9F7 314 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 SIMC1Q8NDZ2 872 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 GTF2H4Q92759 462 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 GON7Q9BXV9 100 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 RETREG1Q9H6L5 497 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 AKIP1Q9NQ31 210 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 TVP23BQ9NYZ1 205 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 IL37Q9NZH6 218 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 RWDD3Q9Y3V2 267 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 TLL1O43897 1013 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 OR2B3O76000 313 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 VIPP01282 170 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 PRDX3P30048 256 aaKnown RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 NAE1Q13564 534 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 STEAP3Q658P3 488 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 LETMD1Q6P1Q0 360 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 NOXA1Q86UR1 476 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 LYSMD2Q8IV50 215 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 GPR152Q8TDT2 470 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 C11orf24Q96F05 449 aaPredicted RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 UCK2Q9BZX2 261 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 ARHGEF33A8MVX0 844 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 NME6O75414 186 aaPredicted RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 GLUD1P00367 558 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 MAP2K3P46734 347 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 XKP51811 444 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 RBBP4Q09028 425 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 C2orf80Q0P641 193 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 ELMSAN1Q6PJG2 1045 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 TBPL2Q6SJ96 375 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 NPAS3Q8IXF0 933 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 ZBED3Q96IU2 234 aaPredicted RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 SUSD3Q96L08 255 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 BBS4Q96RK4 519 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 ZBTB20Q9HC78 741 aaPredicted RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 OARD1Q9Y530 152 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 UBE2QL1A1L167 161 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 IFI30P13284 250 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 NTSP30990 170 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 APLP1P51693 650 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 CDK6Q00534 326 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 PPIGQ13427 754 aaKnown RBP eCLIP8.26□□□□□ -1.091e-7■□□□□ 9.7
PCM1-212ENST00000519253 MED27Q6P2C8 311 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 C11orf96Q7Z7L8 435 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 GJD3Q8N144 294 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 OR8H3Q8N146 312 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 VWA5B2Q8N398 1253 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 FEVQ99581 238 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 MRPL39Q9NYK5 338 aaKnown RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 ZSCAN5BA6NJL1 495 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 INMT-MINDY4F8WBC2 141 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 CSF2P04141 144 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 FEN1P39748 380 aaKnown RBP8.25□□□□□ -1.09
PCM1-212ENST00000519253 ATP12AP54707 1039 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 PPP2R2BQ00005 443 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 GTDC1Q4AE62 458 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 TRMT11Q7Z4G4 463 aaKnown RBP8.25□□□□□ -1.09
PCM1-212ENST00000519253 TRBC2A0A5B9 178 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 I3L521 148 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 SYN3O14994 580 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 OR1I1O60431 355 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 OPN1SWP03999 348 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 HLA-DPB1P04440 258 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 EFNA1P20827 205 aaPredicted RBP8.25□□□□□ -1.09
PCM1-212ENST00000519253 MANFP55145 182 aaKnown RBP8.25□□□□□ -1.09
PCM1-212ENST00000519253 KCNC4Q03721 635 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 STX4Q12846 297 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 VEZF1Q14119 521 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 SPHARQ15513 63 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 BTBD16Q32M84 506 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 CPZQ66K79 652 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 NOXRED1Q6NXP6 359 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 C11orf88Q6PI97 169 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 LINC00471Q8N535 108 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 AQP11Q8NBQ7 271 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 SLC37A3Q8NCC5 494 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 OR7G1Q8NGA0 311 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 OR52L1Q8NGH7 329 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 OR10T2Q8NGX3 314 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 RPL3LQ92901 407 aaKnown RBP8.25□□□□□ -1.09
PCM1-212ENST00000519253 TCRBV5S2A0A599 114 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 SLC28A2O43868 658 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 ARNTP27540 789 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 EPHB3P54753 998 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 ABATP80404 500 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 RAB41Q5JT25 222 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 VARS2Q5ST30 1063 aaKnown RBP8.25□□□□□ -1.09
PCM1-212ENST00000519253 PRAMEF19Q5SWL8 479 aa8.25□□□□□ -1.09
PCM1-212ENST00000519253 MFSD6LQ8IWD5 586 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms