RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NOTUMQ6P988 496 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 BHLHB9Q6PI77 547 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 TRAT1Q6PIZ9 186 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 Q6ZSR9 355 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 NRARPQ7Z6K4 114 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 AMIGO1Q86WK6 493 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 RCOR2Q8IZ40 523 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 RAB42Q8N4Z0 105 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 FAM89BQ8N5H3 189 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 OR7A2PQ8NGA2 310 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 GATAD1Q8WUU5 269 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 APOBEC4Q8WW27 367 aaKnown RBP3.22□□□□□ -1.89
VPS13B-207ENST00000518569 ARHGAP45Q92619 1136 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 RAD54LQ92698 747 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 P2RX5Q93086 422 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 WBP2Q969T9 261 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 TSACCQ96A04 125 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-207ENST00000518569 FAM162AQ96A26 154 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 AZIN2Q96A70 460 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 CENPTQ96BT3 561 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 ART5Q96L15 291 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 CDCA3Q99618 268 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-207ENST00000518569 LPAR4Q99677 370 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 CCDC3Q9BQI4 270 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 XPO4Q9C0E2 1151 aaKnown RBP3.22□□□□□ -1.89
VPS13B-207ENST00000518569 DBNDD1Q9H9R9 158 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 PLCXD1Q9NUJ7 323 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 EPHA6Q9UF33 1036 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 PPP2R2CQ9Y2T4 447 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 SNX5Q9Y5X3 404 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 R4GN57 208 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 IGSF1Q8N6C5 1336 aa3.21□□□□□ -1.89
VPS13B-207ENST00000518569 A0A1W2PPW3 197 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 C15orf61A6NNL5 157 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 PES1O00541 588 aaKnown RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 TEX28O15482 410 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 ARHGEF9O43307 516 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 KIF5CO60282 957 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 C9P02748 559 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 ATP6V1E1P36543 226 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 CETN2P41208 172 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 NKX2-1P43699 371 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 CDX1P47902 265 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 LEPRP48357 1165 aaKnown RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 GMPSP49915 693 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 ERVK11-1P61568 191 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 ROR1Q01973 937 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SULT2A1Q06520 285 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SGCGQ13326 291 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 TNK1Q13470 666 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 HNRNPDQ14103 355 aaKnown RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 TMEM187Q14656 261 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 OPCMLQ14982 345 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SLMAPQ14BN4 828 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 NONOQ15233 471 aaKnown RBP eCLIP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 PTPN14Q15678 1187 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 EXT1Q16394 746 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 RBBP7Q16576 425 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 ZNF74Q16587 644 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 CDO1Q16878 200 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 GPR33Q49SQ1 333 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 LRRC73Q5JTD7 316 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SUSD4Q5VX71 490 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SHEQ5VZ18 495 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 CTR9Q6PD62 1173 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 PET117Q6UWS5 81 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 LEKR1Q6ZMV7 388 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 OTUD6AQ7L8S5 288 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 ANKRD33Q7Z3H0 272 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SPATA21Q7Z572 469 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SPATA19Q7Z5L4 167 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 PHLDB2Q86SQ0 1253 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 GLRX5Q86SX6 157 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 HOGA1Q86XE5 327 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 FAM219AQ8IW50 185 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 MSANTD4Q8NCY6 345 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 GPRC5AQ8NFJ5 357 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SLC26A7Q8TE54 656 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 DEPDC1BQ8WUY9 529 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 METTL21AQ8WXB1 218 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 PIK3R3Q92569 461 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SPATA17Q96L03 361 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 OPRPNQ99935 248 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 INPP5KQ9BT40 448 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 CLEC7AQ9BXN2 247 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 RBM28Q9NW13 759 aaKnown RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 PKD2L2Q9NZM6 624 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 KLHL8Q9P2G9 620 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 CACNG5Q9UF02 275 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 XPO7Q9UIA9 1087 aaKnown RBP3.21□□□□□ -1.9
VPS13B-207ENST00000518569 RASAL2Q9UJF2 1139 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 PRDM4Q9UKN5 801 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 SMC3Q9UQE7 1217 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 HEG1Q9ULI3 1381 aa3.21□□□□□ -1.9
VPS13B-207ENST00000518569 MYO15BQ96JP2 1530 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 A0A087WUV0 522 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-207ENST00000518569 ARHGEF37A1IGU5 675 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 TRIM64A6NGJ6 449 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 C5orf52A6NGY3 159 aa3.2□□□□□ -1.9
VPS13B-207ENST00000518569 TRIM64BA6NI03 449 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms