RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 GPR17Q13304 367 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 ALDH1L2Q3SY69 923 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 PDLIM3Q53GG5 364 aaPredicted RBP4.31□□□□□ -1.72
PCM1-205ENST00000517836 SPOUT1Q5T280 376 aaKnown RBP4.31□□□□□ -1.72
PCM1-205ENST00000517836 C20orf194Q5TEA3 1177 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 SHEQ5VZ18 495 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 C11orf88Q6PI97 169 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 CEACAM20Q6UY09 585 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 MFSD6Q6ZSS7 791 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 MSANTD1Q6ZTZ1 278 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 MMD2Q8IY49 270 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 CNBD1Q8NA66 436 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 OR10V1Q8NGI7 309 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 NSMAFQ92636 917 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 TMEM143Q96AN5 459 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 FAM71F1Q96KD3 344 aaPredicted RBP4.31□□□□□ -1.72
PCM1-205ENST00000517836 SPATA33Q96N06 139 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 PITPNM3Q9BZ71 974 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 GRPEL1Q9HAV7 217 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 RASAL2Q9UJF2 1139 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 ZNF112Q9UJU3 913 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 STUB1Q9UNE7 303 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 TCF19Q9Y242 345 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 RGPD5Q99666 1765 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 PARP4Q9UKK3 1724 aaKnown RBP4.31□□□□□ -1.72
PCM1-205ENST00000517836 ANKRD26Q9UPS8 1709 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 LRRC37A3O60309 1634 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 SLIT3O75094 1523 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 ABCC6O95255 1503 aa4.31□□□□□ -1.72
PCM1-205ENST00000517836 ATRNO75882 1429 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 POLR3AO14802 1390 aaPredicted RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 CENPJQ9HC77 1338 aaPredicted RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 NOTCH4Q99466 2003 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 IGHV4-61A0A0C4DH41 118 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 PRR23D1E9PI22 279 aaPredicted RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 PSMD14O00487 310 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 SNX3O60493 162 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 RPS6KA5O75582 802 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 ATP6AP2O75787 350 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 IGHV4-59P01825 116 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 EDN1P05305 212 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 UMODP07911 640 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 VIMP08670 466 aaKnown RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 FRMD6-AS1P0C7T7 363 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 PRR23D2P0DMB1 279 aaPredicted RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 CASTP20810 708 aaKnown RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 CEACAM8P31997 349 aaPredicted RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 TIMP3P35625 211 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 KRT2P35908 639 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 CLDN15P56746 228 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 B3GALT5-AS1P59052 145 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 ILF2Q12905 390 aaKnown RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 TAF10Q12962 218 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 TUBB2AQ13885 445 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 CDO1Q16878 200 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 LRRC73Q5JTD7 316 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 SLC35D3Q5M8T2 416 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 MARK2Q7KZI7 788 aaKnown RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 RTN4RL2Q86UN3 420 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 DZIP1Q86YF9 867 aaKnown RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 LGI2Q8N0V4 545 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 EID3Q8N140 333 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 ZNF383Q8NA42 475 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 NOA1Q8NC60 698 aaKnown RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 GOT1L1Q8NHS2 421 aaPredicted RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 OLIG1Q8TAK6 271 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 ZNF524Q96C55 264 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 TUBB2BQ9BVA1 445 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 ZMYND12Q9H0C1 365 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 CPVLQ9H3G5 476 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 FAM207AQ9NSI2 230 aaPredicted RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 NOL7Q9UMY1 257 aaKnown RBP4.3□□□□□ -1.72
PCM1-205ENST00000517836 BCL9LQ86UU0 1499 aa4.3□□□□□ -1.72
PCM1-205ENST00000517836 IFITM10A6NMD0 228 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 H0Y626 953 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 BLOC1S5-TXNDC5H3BN57 136 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 IFIT3O14879 490 aaKnown RBP4.29□□□□□ -1.72
PCM1-205ENST00000517836 DFFBO76075 338 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 PGLSO95336 258 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 GSRP00390 522 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 ZFYP08048 801 aaPredicted RBP4.29□□□□□ -1.72
PCM1-205ENST00000517836 CSTF2P33240 577 aaKnown RBP eCLIP4.29□□□□□ -1.72
PCM1-205ENST00000517836 CRKLP46109 303 aaKnown RBP4.29□□□□□ -1.72
PCM1-205ENST00000517836 RGS7P49802 495 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 VAMP7P51809 220 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 MFAP3P55082 362 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 KRT83P78385 493 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 KCNJ10P78508 379 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 UGP2Q16851 508 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 KIAA1644Q3SXP7 199 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 MPP7Q5T2T1 576 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 OR4A47Q6IF82 309 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 SHQ1Q6PI26 577 aaKnown RBP4.29□□□□□ -1.72
PCM1-205ENST00000517836 PHLDB2Q86SQ0 1253 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 FAM219AQ8IW50 185 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 C4orf19Q8IY42 314 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 ANKRD13CQ8N6S4 541 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 OCC1Q8TAD7 63 aa4.29□□□□□ -1.72
PCM1-205ENST00000517836 GRAPLQ8TC17 118 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms