RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 DMRT3Q9NQL9 472 aa25.58■■□□□ 1.68
COL13A1-210ENST00000517713 LMCD1Q9NZU5 365 aa25.58■■□□□ 1.68
COL13A1-210ENST00000517713 V9GYQ6 96 aa25.58■■□□□ 1.68
COL13A1-210ENST00000517713 CROCCQ5TZA2 2017 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 C7orf72A4D263 438 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 DPPA5A6NC42 116 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 CDH1P12830 882 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 TRPC1P48995 793 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 DMPKQ09013 629 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 PPP4R4Q6NUP7 873 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 SMRP1Q8NCR6 262 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 SPNS1Q9H2V7 528 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 DOCK9Q9BZ29 2069 aa25.57■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3DA0A087WVF3 549 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3IA0A087WXS9 549 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3EA0A087X179 549 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3KA0A087X1G2 549 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3FA6NER0 549 aaPredicted RBP25.56■■□□□ 1.68
COL13A1-210ENST00000517713 SAC3D1A6NKF1 404 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3LB9A6J9 549 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3HP0C7X1 549 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 PIM1P11309 404 aaPredicted RBP25.56■■□□□ 1.68
COL13A1-210ENST00000517713 ACP5P13686 325 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TIA1P31483 386 aaKnown RBP eCLIP25.56■■□□□ 1.68
COL13A1-210ENST00000517713 HSD17B2P37059 387 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 WNT3P56703 355 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3GQ6DHY5 549 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3CQ6IPX1 549 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 HORMAD1Q86X24 394 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 CALHM3Q86XJ0 350 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 MICU2Q8IYU8 434 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 TBC1D3Q8IZP1 549 aaPredicted RBP25.56■■□□□ 1.68
COL13A1-210ENST00000517713 UBE2E3Q969T4 207 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 MIEF2Q96C03 454 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 RNF145Q96MT1 663 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 CENPKQ9BS16 269 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 FAM120CQ9NX05 1096 aaKnown RBP25.56■■□□□ 1.68
COL13A1-210ENST00000517713 MAPRE3Q9UPY8 281 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 FAM220BPB1ANY3 271 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 SCAMP2O15127 329 aaKnown RBP25.56■■□□□ 1.68
COL13A1-210ENST00000517713 IGFALSP35858 605 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 CCT8P50990 548 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 CAPRIN2Q6IMN6 1127 aaKnown RBP25.56■■□□□ 1.68
COL13A1-210ENST00000517713 UGT2A3Q6UWM9 527 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 FAM120BQ96EK7 910 aaKnown RBP25.56■■□□□ 1.68
COL13A1-210ENST00000517713 PANX1Q96RD7 426 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 CHID1Q9BWS9 393 aa25.56■■□□□ 1.68
COL13A1-210ENST00000517713 GNG14A0A1W2PPG7 69 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 SOCS2O14508 198 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 FPGTO14772 594 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 PCDH7O60245 1069 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 SCN2BO60939 215 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 TGFB1P01137 390 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 CEACAM5P06731 702 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 MAT2AP31153 395 aaKnown RBP25.55■■□□□ 1.68
COL13A1-210ENST00000517713 GZMMP51124 257 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 CHN2P52757 468 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 CYP2A13Q16696 494 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 HKDC1Q2TB90 917 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 INTS11Q5TA45 600 aaKnown RBP25.55■■□□□ 1.68
COL13A1-210ENST00000517713 GALNT18Q6P9A2 607 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 ACAT2Q9BWD1 397 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 RMI1Q9H9A7 625 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 SIRT5Q9NXA8 310 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 ADGRE2Q9UHX3 823 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 PIAS3Q9Y6X2 628 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 PCM1Q15154 2024 aa25.55■■□□□ 1.68
COL13A1-210ENST00000517713 SCELO95171 688 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 PIK3CBP42338 1070 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 PHEXP78562 749 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 ATP6AP1Q15904 470 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 ANKRD26P1Q6NSI1 321 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 ZNF740Q8NDX6 193 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 CNBD2Q96M20 576 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 NRTNQ99748 197 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 TIMM29Q9BSF4 260 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 OSGEPL1Q9H4B0 414 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 PREBQ9HCU5 417 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 SPATA7Q9P0W8 599 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 SCML1Q9UN30 329 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 SLC17A4Q9Y2C5 497 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 WDR37Q9Y2I8 494 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 TSC22D4Q9Y3Q8 395 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 XIRP2A4UGR9 3374 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 CXCR6O00574 342 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 LAMP1P11279 417 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 DUS1LQ6P1R4 473 aaKnown RBP25.54■■□□□ 1.68
COL13A1-210ENST00000517713 C17orf64Q86WR6 236 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 KRT78Q8N1N4 520 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 PACRGLQ8N7B6 248 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 MENTQ9BUN1 341 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 C9orf16Q9BUW7 83 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 DUSP26Q9BV47 211 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 OSBPL11Q9BXB4 747 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 OR51B5Q9H339 312 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 FZD3Q9NPG1 666 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 UBAP1Q9NZ09 502 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 TAC3Q9UHF0 121 aa25.54■■□□□ 1.68
COL13A1-210ENST00000517713 GABRR3A8MPY1 467 aa25.53■■□□□ 1.68
COL13A1-210ENST00000517713 HPCAL1P37235 193 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms