RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 MLLT10P55197 1068 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 TLE1Q04724 770 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 CKAP4Q07065 602 aaKnown RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 KLC1Q07866 573 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 CBLBQ13191 982 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 SP140Q13342 867 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 USP10Q14694 798 aaKnown RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 MUM1Q2TAK8 710 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 KBTBD12Q3ZCT8 623 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 FAAH2Q6GMR7 532 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 CAPN13Q6MZZ7 669 aaPredicted RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 LRRC8EQ6NSJ5 796 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 TCTN3Q6NUS6 607 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 C8orf74Q6P047 294 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 SBSNQ6UWP8 590 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 ATG14Q6ZNE5 492 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 VN1R4Q7Z5H5 301 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 CTAGE6Q86UF2 777 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 SLC26A11Q86WA9 606 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 RAB43Q86YS6 212 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 TEX19Q8NA77 164 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 ZNF740Q8NDX6 193 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 STT3BQ8TCJ2 826 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 FBF1Q8TES7 1133 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 SEC14L1Q92503 715 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 C8orf44Q96CB5 159 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 MOCOSQ96EN8 888 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 C17orf62Q9BQA9 187 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 SGPP1Q9BX95 441 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 TRIM54Q9BYV2 358 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 SPNS1Q9H2V7 528 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 GPAMQ9HCL2 828 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 ANKMY1Q9P2S6 941 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 TRPC4Q9UBN4 977 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 DMGDHQ9UI17 866 aaKnown RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 CORO1CQ9ULV4 474 aaPredicted RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 FLNBO75369 2602 aaKnown RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 MDC1Q14676 2089 aaKnown RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 SCN3AQ9NY46 2000 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 PABPN1LA6NDY0 278 aaKnown RBP10.93□□□□□ -0.66
VCAN-212ENST00000515397 SOCS6O14544 535 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 NDC80O14777 642 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 DNAJB6O75190 326 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 JRKO75564 520 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 B3GALT4O96024 378 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 SERPIND1P05546 499 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 ZGLP1P0C6A0 271 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 CCDC166P0CW27 439 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 PIM1P11309 404 aaPredicted RBP10.93□□□□□ -0.66
VCAN-212ENST00000515397 EZRP15311 586 aaKnown RBP10.93□□□□□ -0.66
VCAN-212ENST00000515397 IL1RNP18510 177 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 FBLP22087 321 aaKnown RBP10.93□□□□□ -0.66
VCAN-212ENST00000515397 PGDP52209 483 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 SLC12A2P55011 1212 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 PPP1R3AQ16821 1122 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 NADK2Q4G0N4 442 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 DCAF10Q5QP82 559 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 YOD1Q5VVQ6 348 aaPredicted RBP10.93□□□□□ -0.66
VCAN-212ENST00000515397 KIRREL2Q6UWL6 708 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 LCTLQ6UWM7 567 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 CMC1Q7Z7K0 106 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 PARP9Q8IXQ6 854 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 ARHGEF39Q8N4T4 335 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 NKAPQ8N5F7 415 aaKnown RBP10.93□□□□□ -0.66
VCAN-212ENST00000515397 TMEM102Q8N9M5 508 aaPredicted RBP10.93□□□□□ -0.66
VCAN-212ENST00000515397 KCT2Q8NC54 265 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 OR9A4Q8NGU2 314 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 OR56A3Q8NH54 315 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 ZCCHC10Q8TBK6 192 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 IFT81Q8WYA0 676 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 ESAMQ96AP7 390 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 MIEF2Q96C03 454 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 FBXL8Q96CD0 374 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 PDLIM5Q96HC4 596 aaKnown RBP10.93□□□□□ -0.66
VCAN-212ENST00000515397 EGFL8Q99944 293 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 CRB3Q9BUF7 120 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 ZBTB20Q9HC78 741 aaPredicted RBP10.93□□□□□ -0.66
VCAN-212ENST00000515397 ZDHHC18Q9NUE0 388 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 TXNDC16Q9P2K2 825 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 CTNNAL1Q9UBT7 734 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 FBXL4Q9UKA2 621 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 SLC22A14Q9Y267 594 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 HS3ST3B1Q9Y662 390 aa10.93□□□□□ -0.66
VCAN-212ENST00000515397 VSTM2BA6NLU5 285 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 SGK494L7N484 410 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 OR1F1O43749 312 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 ONECUT2O95948 504 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 ALBP02768 609 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 GP5P40197 560 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 HNF4AP41235 474 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 KCNC1P48547 511 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 EFNA3P52797 238 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 CAV1Q03135 178 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 OCA2Q04671 838 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 KLRB1Q12918 225 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 BMPR2Q13873 1038 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 NAA25Q14CX7 972 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 RBBP7Q16576 425 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 WHAMMP3Q1A5X7 153 aa10.92□□□□□ -0.66
VCAN-212ENST00000515397 MED25Q71SY5 747 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms