RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 PRICKLE2Q7Z3G6 844 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 THOC6Q86W42 341 aaKnown RBP19.36■□□□□ 0.69
USP53-208ENST00000514305 LRRC56Q8IYG6 542 aaPredicted RBP19.36■□□□□ 0.69
USP53-208ENST00000514305 OR2L3Q8NG85 312 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 OR2A1Q8NGT9 310 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 UBTD2Q8WUN7 234 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 N4BP2L2Q92802 583 aaPredicted RBP19.36■□□□□ 0.69
USP53-208ENST00000514305 TCTN2Q96GX1 697 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 PITPNM3Q9BZ71 974 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 ZNF768Q9H5H4 540 aaKnown RBP19.36■□□□□ 0.69
USP53-208ENST00000514305 DNAJC11Q9NVH1 559 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 SOHLH2Q9NX45 425 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 SEMA5BQ9P283 1151 aa19.36■□□□□ 0.69
USP53-208ENST00000514305 K7EPI3 171 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 AGPSO00116 658 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 PRPF4O43172 522 aaKnown RBP eCLIP19.35■□□□□ 0.69
USP53-208ENST00000514305 CCNT2O60583 730 aaKnown RBP19.35■□□□□ 0.69
USP53-208ENST00000514305 H2AFYO75367 372 aaKnown RBP19.35■□□□□ 0.69
USP53-208ENST00000514305 SPAG7O75391 227 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 MTHFD2P13995 350 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 CPA3P15088 417 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 EPB42P16452 691 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 SLC6A12P48065 614 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 HSPA7P48741 367 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 PRKAA2P54646 552 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 MAGOHP61326 146 aaKnown RBP19.35■□□□□ 0.69
USP53-208ENST00000514305 CYP4F2P78329 520 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 HSD11B2P80365 405 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 NFKB2Q00653 900 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 PCBP2Q15366 365 aaKnown RBP eCLIP19.35■□□□□ 0.69
USP53-208ENST00000514305 ZC3H12BQ5HYM0 836 aaKnown RBP19.35■□□□□ 0.69
USP53-208ENST00000514305 ARHGAP22Q7Z5H3 698 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 HOMEZQ8IX15 550 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 CACNA2D3Q8IZS8 1091 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 PTGR2Q8N8N7 351 aaPredicted RBP19.35■□□□□ 0.69
USP53-208ENST00000514305 TCP10LQ8TDR4 215 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 PPP4R1Q8TF05 950 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 KLHL6Q8WZ60 621 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 PYCR2Q96C36 320 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 PHF21BQ96EK2 531 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 ATP6V1G3Q96LB4 118 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 ACAT2Q9BWD1 397 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 CHRNA10Q9GZZ6 450 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 FANCEQ9HB96 536 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 TMEM184CQ9NVA4 438 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 SLC22A14Q9Y267 594 aa19.35■□□□□ 0.69
USP53-208ENST00000514305 A0A1W2PPV9 198 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 KRT87PA6NCN2 255 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 FOXO6A8MYZ6 492 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 PROCP04070 461 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 FAM87AP0C7U9 286 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 WT1P19544 449 aaPredicted RBP19.34■□□□□ 0.69
USP53-208ENST00000514305 CXCR2P25025 360 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 ACY1Q03154 408 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 CDC16Q13042 620 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 TBR1Q16650 682 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 PDK4Q16654 411 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 FIGLAQ6QHK4 219 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 CEACAM20Q6UY09 585 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 CDHR3Q6ZTQ4 885 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 BPHLQ86WA6 291 aaPredicted RBP19.34■□□□□ 0.69
USP53-208ENST00000514305 BMPERQ8N8U9 685 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 SNX31Q8N9S9 440 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 TRAPPC9Q96Q05 1148 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 SH3GL2Q99962 352 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 ZPBPQ9BS86 351 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 NKIRAS1Q9NYS0 192 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 STK38LQ9Y2H1 464 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 KLK4Q9Y5K2 254 aa19.34■□□□□ 0.69
USP53-208ENST00000514305 TAPBPO15533 448 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 TYROBPO43914 113 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 RAD1O60671 282 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 LIFP15018 202 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 NPPBP16860 134 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 NELFEP18615 380 aaKnown RBP19.33■□□□□ 0.68
USP53-208ENST00000514305 PEBP1P30086 187 aaKnown RBP19.33■□□□□ 0.68
USP53-208ENST00000514305 CCR8P51685 355 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 SLC18A1P54219 525 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 MC2RQ01718 297 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 ZYG11AQ6WRX3 759 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 ADCK2Q7Z695 626 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 C19orf47Q8N9M1 422 aaKnown RBP19.33■□□□□ 0.68
USP53-208ENST00000514305 ARMC2Q8NEN0 867 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 SLC5A11Q8WWX8 675 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 KIAA1143Q96AT1 154 aaPredicted RBP19.33■□□□□ 0.68
USP53-208ENST00000514305 TLCD1Q96CP7 247 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 MAGEB10Q96LZ2 347 aaPredicted RBP19.33■□□□□ 0.68
USP53-208ENST00000514305 FAM111AQ96PZ2 611 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 COPG2Q9UBF2 871 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 BTRCQ9Y297 605 aa19.33■□□□□ 0.68
USP53-208ENST00000514305 TENM4Q6N022 2769 aa19.32■□□□□ 0.68
USP53-208ENST00000514305 IGHV5-51A0A0C4DH38 117 aa19.32■□□□□ 0.68
USP53-208ENST00000514305 SLC9B1P1A6NJY1 282 aa19.32■□□□□ 0.68
USP53-208ENST00000514305 A8MT66 165 aa19.32■□□□□ 0.68
USP53-208ENST00000514305 IMPDH1P20839 514 aa19.32■□□□□ 0.68
USP53-208ENST00000514305 EEF1DP29692 281 aaKnown RBP19.32■□□□□ 0.68
USP53-208ENST00000514305 GRIA3P42263 894 aa19.32■□□□□ 0.68
USP53-208ENST00000514305 SEPHS1P49903 392 aa19.32■□□□□ 0.68
USP53-208ENST00000514305 RELAQ04206 551 aa19.32■□□□□ 0.68
USP53-208ENST00000514305 LAPTM5Q13571 262 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms