RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 ATXN7L1Q9ULK2 861 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 PCDHGA11Q9Y5H2 935 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 KLK4Q9Y5K2 254 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 ZNF462Q96JM2 2506 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 SLC9B1P1A6NJY1 282 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 A8MU76 341 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 D6RAR5 112 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 TXNDC9O14530 226 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 KLF11O14901 512 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 CHEK2O96017 543 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 MT-CO3P00414 261 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 ENO1P06733 434 aaKnown RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 FGF3P11487 239 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 CDH1P12830 882 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 JUPP14923 745 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 EZRP15311 586 aaKnown RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 MPSTP25325 297 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 GSTM2P28161 218 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 PEBP1P30086 187 aaKnown RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 GRIA3P42263 894 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 SLC1A6P48664 564 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 INHBCP55103 352 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 GFERP55789 205 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 RPS15AP62244 130 aaKnown RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 PHEXP78562 749 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 IFT88Q13099 833 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 RCN2Q14257 317 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 RBBP5Q15291 538 aaKnown RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 ZXDCQ2QGD7 858 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 KIAA1614Q5VZ46 1190 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 TTC19Q6DKK2 380 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 MED27Q6P2C8 311 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 SLCO4C1Q6ZQN7 724 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 FRMD7Q6ZUT3 714 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 GPRIN3Q6ZVF9 776 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 TMPRSS11BQ86T26 416 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 ZNF655Q8N720 491 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 OR4K1Q8NGD4 311 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 CCT6BQ92526 530 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 RERGQ96A58 199 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 SEC16BQ96JE7 1060 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 FAR2Q96K12 515 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 MAGEB18Q96M61 343 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 TRAPPC9Q96Q05 1148 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 DEPDC7Q96QD5 511 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 CMKLR1Q99788 373 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 NUDT22Q9BRQ3 303 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 NLNQ9BYT8 704 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 PITPNM3Q9BZ71 974 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 TWSG1Q9GZX9 223 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 FANCEQ9HB96 536 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 SOHLH2Q9NX45 425 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 SEMA5BQ9P283 1151 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 SNX6Q9UNH7 406 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 MN1Q10571 1320 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-214ENST00000513989 PIEZO2Q9H5I5 2752 aa9.75□□□□□ -0.85
NEDD9-214ENST00000513989 LRP4O75096 1905 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ASH1LQ9NR48 2969 aaKnown RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 KCNE1BA0A087WTH5 132 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 IGHV5-51A0A0C4DH38 117 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 IGHV5-10-1A0A0J9YXX1 117 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ANKDD1BA6NHY2 528 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 LRRC14BA6NHZ5 514 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 E7EQ34 232 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 OR1F1O43749 312 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 SRPX2O60687 465 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 WFS1O76024 890 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ESRRBO95718 433 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 KRT6AP02538 564 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 KRT6BP04259 564 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ANKRD34CP0C6C1 535 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 THRAP10827 490 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 HGFP14210 728 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 NELFEP18615 380 aaKnown RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 MAGP20916 626 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 PSMB5P28074 263 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 SERPINB1P30740 379 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 MDH1P40925 334 aaKnown RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 MLLT3P42568 568 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 KRT6CP48668 564 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 CSNK1G2P78368 415 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 INSM1Q01101 510 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ACY1Q03154 408 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 CFHR1Q03591 330 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ZFP36L1Q07352 338 aaKnown RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 DOC2AQ14183 400 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ARL13AQ5H913 290 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 TMIGD1Q6UXZ0 262 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ZNF574Q6ZN55 896 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ZCCHC23Q6ZST2 131 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ARHGAP22Q7Z5H3 698 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 TRIM73Q86UV7 250 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 BPHLQ86WA6 291 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 TMPRSS12Q86WS5 348 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 CRLF3Q8IUI8 442 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 MCATQ8IVS2 390 aaKnown RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 CLYBLQ8N0X4 340 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 CACTIN-AS1Q8N1I8 211 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 GALNT15Q8N3T1 639 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms