RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 RASSF1Q9NS23 344 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 RUVBL2Q9Y230 463 aaKnown RBP9.88□□□□□ -0.83
CLDND1-227ENST00000513452 COL6A5A8TX70 2615 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 A0A1W2PPV9 198 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 OR2W5A6NFC9 320 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 IQCF5A8MTL0 148 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 F8W8V4 182 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 NDC80O14777 642 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 P2RX6O15547 441 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 HS6ST1O60243 411 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 GPC4O75487 556 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 PDE9AO76083 593 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 APOA4P06727 396 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 TMEM253P0C7T8 217 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 TFEBP19484 476 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 PCSK6P29122 969 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 CMPK1P30085 196 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 FOXN2P32314 431 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 TAS2R50P59544 299 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 SNRPNP63162 240 aaKnown RBP9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ZBED6P86452 979 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 POU6F1Q14863 301 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 NAA25Q14CX7 972 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 DEFB113Q30KQ7 82 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 CMPK2Q5EBM0 449 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ANKRD20A2Q5SQ80 823 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ANKRD20A1Q5TYW2 823 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ANKRD20A3Q5VUR7 823 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 GARNL3Q5VVW2 1013 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 PAPD4Q6PIY7 484 aaKnown RBP9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ARSKQ6UWY0 536 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ACAD11Q709F0 780 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 CDC20BQ86Y33 519 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ARHGEF39Q8N4T4 335 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 POGLUT1Q8NBL1 392 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 OR5M3Q8NGP4 307 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 OR10Q1Q8NGQ4 319 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 OR9A4Q8NGU2 314 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 M1APQ8TC57 530 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 STYXQ8WUJ0 223 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 SKA2Q8WVK7 121 aaPredicted RBP9.87□□□□□ -0.83
CLDND1-227ENST00000513452 RERGQ96A58 199 aaPredicted RBP9.87□□□□□ -0.83
CLDND1-227ENST00000513452 RAD51AP1Q96B01 352 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 MS4A3Q96HJ5 214 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ALS2CR12Q96Q35 445 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 PLCD4Q9BRC7 762 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 SLC6A16Q9GZN6 736 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 CDCP1Q9H5V8 836 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ARNT2Q9HBZ2 717 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 PIH1D1Q9NWS0 290 aaKnown RBP9.87□□□□□ -0.83
CLDND1-227ENST00000513452 HCN3Q9P1Z3 774 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 FEZ2Q9UHY8 353 aaPredicted RBP9.87□□□□□ -0.83
CLDND1-227ENST00000513452 ALG6Q9Y672 507 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 NFS1Q9Y697 457 aa9.87□□□□□ -0.83
CLDND1-227ENST00000513452 HRNRQ86YZ3 2850 aaPredicted RBP9.87□□□□□ -0.83
CLDND1-227ENST00000513452 hCG_1818297A0A087WSY0 165 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 MACROD2A1Z1Q3 448 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 CCDC162PA2VCL2 907 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 SOWAHDA6NJG2 315 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 SPOPO43791 374 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 PHF2O75151 1096 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 LY6G6DO95868 133 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 STATHP02808 62 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 RAF1P04049 648 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 CYC1P08574 325 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 TPP2P29144 1249 aaPredicted RBP9.86□□□□□ -0.83
CLDND1-227ENST00000513452 KIR2DL3P43628 341 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 XCR1P46094 333 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 AVPR1BP47901 424 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 CYB561P49447 251 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 AGTR2P50052 363 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 ITGA8P53708 1063 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 TMED2Q15363 201 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 SFT2D3Q587I9 215 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 EMC4Q5J8M3 183 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 ARHGAP11AQ6P4F7 1023 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 ZNF227Q86WZ6 799 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 LGI4Q8N135 537 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 KIF2BQ8N4N8 673 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 HMGCLL1Q8TB92 370 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 TMEM125Q96AQ2 219 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 LRRC45Q96CN5 670 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 SPATA13Q96N96 652 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 SCN2AQ99250 2005 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 TSSK1BQ9BXA7 367 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 MRPS30Q9NP92 439 aaKnown RBP9.86□□□□□ -0.83
CLDND1-227ENST00000513452 DMRT3Q9NQL9 472 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 CRIM1Q9NZV1 1036 aa9.86□□□□□ -0.83
CLDND1-227ENST00000513452 TTC7AQ9ULT0 858 aaPredicted RBP9.86□□□□□ -0.83
CLDND1-227ENST00000513452 KLF13Q9Y2Y9 288 aaPredicted RBP9.86□□□□□ -0.83
CLDND1-227ENST00000513452 IGKV1-8A0A0C4DH67 115 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 A6NNC1 897 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 STK10O94804 968 aaKnown RBP9.85□□□□□ -0.83
CLDND1-227ENST00000513452 ATE1O95260 518 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 C1orf105O95561 183 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 SERPINC1P01008 464 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 COMTP21964 271 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 HOXC12P31275 282 aa9.85□□□□□ -0.83
CLDND1-227ENST00000513452 NR0B1P51843 470 aaKnown RBP9.85□□□□□ -0.83
CLDND1-227ENST00000513452 ACTN3Q08043 901 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms