RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 A0A0U1RQJ8 604 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 FAM237BA0A1B0GVD1 139 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 OR2A25A4D2G3 310 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 F8W8V4 182 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 I3L1I5 382 aaPredicted RBP10.54□□□□□ -0.72
RNF4-218ENST00000513284 QSOX1O00391 747 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 RASGRF2O14827 1237 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 OR1I1O60431 355 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 GPC4O75487 556 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 HEXAP06865 529 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 C8orf89P0DMQ9 161 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 AP2B1P63010 937 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 SPARCL1Q14515 664 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 MAPKAPK3Q16644 382 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 CMPK2Q5EBM0 449 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 DNAJC21Q5F1R6 531 aaKnown RBP10.54□□□□□ -0.72
RNF4-218ENST00000513284 C11orf63Q6NUN7 778 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 BBS12Q6ZW61 710 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 CDC20BQ86Y33 519 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 ZZZ3Q8IYH5 903 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 CCDC170Q8IYT3 715 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 EID3Q8N140 333 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 OR2L3Q8NG85 312 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 CFAP61Q8NHU2 1237 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 MVB12AQ96EY5 273 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 MMABQ96EY8 250 aaPredicted RBP10.54□□□□□ -0.72
RNF4-218ENST00000513284 CABS1Q96KC9 395 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 CLEC4MQ9H2X3 399 aaPredicted RBP10.54□□□□□ -0.72
RNF4-218ENST00000513284 ARNT2Q9HBZ2 717 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 C14orf105Q9NVL8 296 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 NLE1Q9NVX2 485 aaPredicted RBP10.54□□□□□ -0.72
RNF4-218ENST00000513284 GNPTGQ9UJJ9 305 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 ADAM21Q9UKJ8 722 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 CDC14AQ9UNH5 594 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 ZANQ9Y493 2812 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 ATRQ13535 2644 aa10.54□□□□□ -0.72
RNF4-218ENST00000513284 PHF3Q92576 2039 aaKnown RBP10.53□□□□□ -0.72
RNF4-218ENST00000513284 OR51F1A6NGY5 319 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 GABRR3A8MPY1 467 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 KDM1AO60341 852 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 NME2P1O60361 137 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 FKBP9O95302 570 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 FTH1P02794 183 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 PTMAP06454 111 aaKnown RBP10.53□□□□□ -0.72
RNF4-218ENST00000513284 ZNF24P17028 368 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 TFEBP19484 476 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 NME2P22392 152 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 PSMA3P25788 255 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 RBL1P28749 1068 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 ADSLP30566 484 aaPredicted RBP10.53□□□□□ -0.72
RNF4-218ENST00000513284 RFC3P40938 356 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 DGKQP52824 942 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 OC90Q02509 493 aaPredicted RBP10.53□□□□□ -0.72
RNF4-218ENST00000513284 PLOD1Q02809 727 aaPredicted RBP10.53□□□□□ -0.72
RNF4-218ENST00000513284 PACS1Q6VY07 963 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 CLYBLQ8N0X4 340 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 RNF214Q8ND24 703 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 M1APQ8TC57 530 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 LKAAEAR1Q8TD35 194 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 NUDT8Q8WV74 236 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 PWWP2AQ96N64 755 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 ALS2CR12Q96Q35 445 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 CDCP1Q9H5V8 836 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
RNF4-218ENST00000513284 ANK3Q12955 4377 aaKnown RBP10.53□□□□□ -0.72
RNF4-218ENST00000513284 IGKV1-8A0A0C4DH67 115 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 GOLGA6L9A6NEM1 432 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 SOWAHDA6NJG2 315 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 IQCF5A8MTL0 148 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 PDE9AO76083 593 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 TJP3O95049 919 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 ATE1O95260 518 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 RBP3P10745 1247 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 TPH1P17752 444 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 NAP1L1P55209 391 aaKnown RBP10.52□□□□□ -0.73
RNF4-218ENST00000513284 EIF3EP60228 445 aaKnown RBP10.52□□□□□ -0.73
RNF4-218ENST00000513284 HSPA14Q0VDF9 509 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 TBX2Q13207 712 aaPredicted RBP10.52□□□□□ -0.73
RNF4-218ENST00000513284 ITIH4Q14624 930 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 DEFB113Q30KQ7 82 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 ANKRD20A2Q5SQ80 823 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 ANKRD20A1Q5TYW2 823 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 ANKRD20A3Q5VUR7 823 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 DARS2Q6PI48 645 aaKnown RBP10.52□□□□□ -0.73
RNF4-218ENST00000513284 ARSKQ6UWY0 536 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 CHSY3Q70JA7 882 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 CAMKMTQ7Z624 323 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 ANKRD37Q7Z713 158 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 DCUN1D3Q8IWE4 304 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 KLHDC8BQ8IXV7 354 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 OR52N2Q8NGI0 321 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 C16orf52Q8NHV5 167 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 HMGCLL1Q8TB92 370 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 SPATA13Q96N96 652 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 OR2A5Q96R48 311 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 TTC1Q99614 292 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 ZFYVE21Q9BQ24 234 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 DPH7Q9BTV6 452 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 HEMGNQ9BXL5 484 aa10.52□□□□□ -0.73
RNF4-218ENST00000513284 TP63Q9H3D4 680 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms