RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 NR5A2O00482 541 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 CTDSPLO15194 276 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 SLC16A8O95907 504 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 STAG3L1P0CL83 205 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 DLATP10515 647 aaKnown RBP2.83□□□□□ -1.96
CHD1-207ENST00000511628 GNB3P16520 340 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 OR3A1P47881 315 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 MAZP56270 477 aaKnown RBP2.83□□□□□ -1.96
CHD1-207ENST00000511628 GPR17Q13304 367 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 GPR33Q49SQ1 333 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 IQCCQ4KMZ1 466 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 CCDC158Q5M9N0 1113 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 LYSMD4Q5XG99 296 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 PIGWQ7Z7B1 504 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 TMCO5AQ8N6Q1 288 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 OR7G3Q8NG95 312 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 TMEM190Q8WZ59 177 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 SGF29Q96ES7 293 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 LINC00479Q96M42 142 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 HNRNPABQ99729 332 aaKnown RBP2.83□□□□□ -1.96
CHD1-207ENST00000511628 MAP3K3Q99759 626 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 PI4K2AQ9BTU6 479 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 ZNF350Q9GZX5 532 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 MIS12Q9H081 205 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 ZMYND12Q9H0C1 365 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 TMEM206Q9H813 350 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 SIX2Q9NPC8 291 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 TNNQ9UQP3 1299 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 PCDHGA1Q9Y5H4 931 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 KLK4Q9Y5K2 254 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 ARID2Q68CP9 1835 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 F8VVB4 439 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 F8VWA3 439 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 TRMUO75648 421 aaKnown RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 LUC7L3O95232 432 aaKnown RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 NADKO95544 446 aaPredicted RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 EML2O95834 649 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 GPIP06744 558 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 F3P13726 295 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 ITIH1P19827 911 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 LHCGRP22888 699 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 ITGA3P26006 1051 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 CCND3P30281 292 aaPredicted RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 CEACAM8P31997 349 aaPredicted RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 CSTF2P33240 577 aaKnown RBP eCLIP2.82□□□□□ -1.96
CHD1-207ENST00000511628 CLK1P49759 484 aaKnown RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 LUMP51884 338 aaPredicted RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 KRTAP10-5P60370 271 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 ASIC1P78348 528 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 KLC1Q07866 573 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 RCN2Q14257 317 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 EXT1Q16394 746 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 PHKG1Q16816 387 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 TWISTNBQ3B726 338 aaPredicted RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 KRT71Q3SY84 523 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 SLC39A12Q504Y0 691 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 GLRA4Q5JXX5 417 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 FAM46CQ5VWP2 391 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 ZNF770Q6IQ21 691 aaPredicted RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 UGT3A1Q6NUS8 523 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 TMEM270Q6UE05 265 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 SLC16A9Q7RTY1 509 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 CCDC91Q7Z6B0 441 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 AQP12AQ8IXF9 295 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 NDUFAF2Q8N183 169 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 SFRP1Q8N474 314 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 RYBPQ8N488 228 aaPredicted RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 AMER3Q8N944 861 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 LRTM2Q8N967 370 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 OR4C3Q8NH37 302 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 OR2T6Q8NHC8 308 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 SAP25Q8TEE9 199 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 SEPT1Q8WYJ6 367 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 TEKT1Q969V4 418 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 GDAP1L1Q96MZ0 367 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 KLHL5Q96PQ7 755 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 OPRPNQ99935 248 aaPredicted RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 TRIM15Q9C019 465 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 LSG1Q9H089 658 aaKnown RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 WDR13Q9H1Z4 485 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 RIMS4Q9H426 269 aaPredicted RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 ACTL8Q9H568 366 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 SRD5A3Q9H8P0 318 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 TRPV4Q9HBA0 871 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 IARS2Q9NSE4 1012 aaKnown RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 ZDHHC18Q9NUE0 388 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 ABCB8Q9NUT2 735 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 INTS9Q9NV88 658 aaKnown RBP2.82□□□□□ -1.96
CHD1-207ENST00000511628 PRSS21Q9Y6M0 314 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 R4GN57 208 aa2.82□□□□□ -1.96
CHD1-207ENST00000511628 IGHV4-61A0A0C4DH41 118 aa2.81□□□□□ -1.96
CHD1-207ENST00000511628 A0A0J9YWU9 116 aa2.81□□□□□ -1.96
CHD1-207ENST00000511628 TRBV5-5A0A0J9YX44 114 aa2.81□□□□□ -1.96
CHD1-207ENST00000511628 H3BMM5 538 aa2.81□□□□□ -1.96
CHD1-207ENST00000511628 ZNF263O14978 683 aa2.81□□□□□ -1.96
CHD1-207ENST00000511628 KINO60870 393 aaKnown RBP2.81□□□□□ -1.96
CHD1-207ENST00000511628 ZNF821O75541 412 aaPredicted RBP2.81□□□□□ -1.96
CHD1-207ENST00000511628 CLPTM1O96005 669 aa2.81□□□□□ -1.96
CHD1-207ENST00000511628 GH1P01241 217 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms