RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 GDAP2Q9NXN4 497 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 NUP50Q9UKX7 468 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 CARD8Q9Y2G2 431 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 XPNPEP2O43895 674 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 MTX2O75431 263 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 KAT7O95251 611 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 EBLN1P0CF75 366 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ZBTB48P10074 688 aaPredicted RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 ACP5P13686 325 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 CXCR1P25024 350 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 HOXC12P31275 282 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ACVRL1P37023 503 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ZNF630Q2M218 657 aaPredicted RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 KIAA1614Q5VZ46 1190 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 PYHIN1Q6K0P9 492 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 CEACAM20Q6UY09 585 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 HFE2Q6ZVN8 426 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 NRSN1Q8IZ57 195 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 SLC37A3Q8NCC5 494 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 SH3RF2Q8TEC5 729 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ZUFSPQ96AP4 578 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ZC3H10Q96K80 434 aaKnown RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 ALPK1Q96QP1 1244 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 SLC30A2Q9BRI3 323 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 AIFM2Q9BRQ8 373 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 CYTH4Q9UIA0 394 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ALG5Q9Y673 324 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 NFAT5O94916 1531 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 A0A0G2JPF8 293 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 LCHNA4D1U4 455 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 HNRNPCL3B7ZW38 293 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 RAB36O95755 333 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 HNRNPCL4P0DMR1 293 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ATP4BP51164 291 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 SLC3A1Q07837 685 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ST3GAL3Q11203 375 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ALG1LQ6GMV1 187 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 C6orf89Q6UWU4 347 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 PAQR7Q86WK9 346 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ENDOVQ8N8Q3 282 aaKnown RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 PNLDC1Q8NA58 520 aaKnown RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 ZNF527Q8NB42 609 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 TMEM80Q96HE8 168 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 LRCH3Q96II8 777 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 SCGB3A2Q96PL1 93 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 LIN28AQ9H9Z2 209 aaKnown RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 SLC28A3Q9HAS3 691 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 GKN1Q9NS71 199 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 UTS2RQ9UKP6 389 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ASB3Q9Y575 518 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ZNF541Q9H0D2 1346 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 M0R2N6 131 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 PPEF2O14830 753 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 HTRA2O43464 458 aaPredicted RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 TLX2O43763 284 aaPredicted RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 DIRAS1O95057 198 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 PRLP01236 227 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 GGT5P36269 586 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ACTR1BP42025 376 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ACTR1AP61163 376 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ANKDD1AQ495B1 522 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 SPANXN4Q5MJ08 99 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 FAM182AQ5T1J6 154 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 LRP10Q7Z4F1 713 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 CHERPQ8IWX8 916 aaKnown RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 FUZQ9BT04 418 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 SPATA9Q9BWV2 254 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 TBL1XR1Q9BZK7 514 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 SMOC2Q9H3U7 446 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 MRM3Q9HC36 420 aaKnown RBP10.3□□□□□ -0.76
NEK1-206ENST00000510533 HPF1Q9NWY4 346 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 ABCG2Q9UNQ0 655 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 CMAHPQ9Y471 501 aa10.3□□□□□ -0.76
NEK1-206ENST00000510533 A0A0G2JLL6 359 aaPredicted RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 ANKRD66B4E2M5 251 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 H0YGN5 161 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 FAM189A1O60320 539 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 PRKACGP22612 351 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 GLDCP23378 1020 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 STOMP27105 288 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 NDUFS1P28331 727 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 GRK5P34947 590 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 BDKRB1P46663 353 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 CDH11P55287 796 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 ENPP2Q13822 863 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 BRAT1Q6PJG6 821 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 XKR5Q6UX68 686 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 PRRT2Q7Z6L0 340 aaPredicted RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 CILP2Q8IUL8 1156 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 RELTQ969Z4 430 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 NXPE2Q96DL1 559 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 C12orf42Q96LP6 360 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 NEUROD4Q9HD90 331 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 NFS1Q9Y697 457 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 FXYD6-FXYD2A0A087WZ82 144 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 A0A1W2PPW3 197 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 NDUFS4O43181 175 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 CAPN15O75808 1086 aa10.29□□□□□ -0.76
NEK1-206ENST00000510533 CHRM1P11229 460 aaPredicted RBP10.29□□□□□ -0.76
NEK1-206ENST00000510533 FSHRP23945 695 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms