RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ANXA8L1Q5VT79 327 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 TMEM179BQ7Z7N9 219 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 NFKBIDQ8NI38 313 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 ART5Q96L15 291 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 ARHGAP39Q9C0H5 1083 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 TRIT1Q9H3H1 467 aaKnown RBP14.43□□□□□ -0.1
USP38-202ENST00000510377 TVP23BQ9NYZ1 205 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 LYVE1Q9Y5Y7 322 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.43□□□□□ -0.1
USP38-202ENST00000510377 PRR23AA6NEV1 266 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 FADS2P1A8MWK0 482 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 ARNTLO00327 626 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 IFNW1P05000 195 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 SRP54P61011 504 aaKnown RBP14.43□□□□□ -0.1
USP38-202ENST00000510377 SOWAHCQ53LP3 525 aaPredicted RBP14.43□□□□□ -0.1
USP38-202ENST00000510377 SHQ1Q6PI26 577 aaKnown RBP14.43□□□□□ -0.1
USP38-202ENST00000510377 ELMOD1Q8N336 334 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 BEND7Q8N7W2 519 aaPredicted RBP14.43□□□□□ -0.1
USP38-202ENST00000510377 GORASP2Q9H8Y8 452 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 COMMD3Q9UBI1 195 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 ACSL6Q9UKU0 697 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 PCDHGA10Q9Y5H3 936 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 DLGAP1O14490 977 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 OR7A17O14581 309 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 WNT9AO14904 365 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 IFI30P13284 250 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 CDKN2CP42773 168 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 TUBA1BP68363 451 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 NKG7Q16617 165 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 TYSND1Q2T9J0 566 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 IQCCQ4KMZ1 466 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 LYPLAL1Q5VWZ2 237 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 DHRS4L2Q6PKH6 230 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 TUBA1AQ71U36 451 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 FAM83FQ8NEG4 500 aaPredicted RBP14.43□□□□□ -0.1
USP38-202ENST00000510377 FBXO22Q8NEZ5 403 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 MBOAT4Q96T53 435 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 CSF3RQ99062 836 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 CORO1BQ9BR76 489 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 MROQ9BYG7 248 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 ACOT13Q9NPJ3 140 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 CREBZFQ9NS37 354 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 ENOPH1Q9UHY7 261 aa14.43□□□□□ -0.1
USP38-202ENST00000510377 RUVBL1Q9Y265 456 aaKnown RBP14.43□□□□□ -0.1
USP38-202ENST00000510377 QSER1Q2KHR3 1735 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 MICAL3Q7RTP6 2002 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 CASKO14936 926 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 KIAA0513O60268 411 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 CACNG3O60359 315 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 CPNE6O95741 557 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 UGT2B15P54855 530 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 CBLBQ13191 982 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 MAD2L1BPQ15013 274 aaPredicted RBP14.42□□□□□ -0.1
USP38-202ENST00000510377 RNASE12Q5GAN4 147 aaKnown RBP14.42□□□□□ -0.1
USP38-202ENST00000510377 XKR4Q5GH76 650 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 CEP78Q5JTW2 689 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 ZNF517Q6ZMY9 492 aaPredicted RBP14.42□□□□□ -0.1
USP38-202ENST00000510377 PHYKPLQ8IUZ5 450 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 AQP11Q8NBQ7 271 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 ASZ1Q8WWH4 475 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 TP63Q9H3D4 680 aaPredicted RBP14.42□□□□□ -0.1
USP38-202ENST00000510377 KNL1Q8NG31 2342 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 FAM240BA0A1B0GVZ2 78 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 STK25O00506 426 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 ZNF865P0CJ78 1059 aaPredicted RBP14.42□□□□□ -0.1
USP38-202ENST00000510377 PPIBP23284 216 aaKnown RBP14.42□□□□□ -0.1
USP38-202ENST00000510377 AP1S1P61966 158 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 NEK5Q6P3R8 708 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 USP30Q70CQ3 517 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 TSPAN33Q86UF1 283 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 GALNT12Q8IXK2 581 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 SLC5A8Q8N695 610 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 GANCQ8TET4 914 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 XAGE5Q8WWM1 108 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 MYEOVQ96EZ4 313 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 COL21A1Q96P44 957 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 SGIP1Q9BQI5 828 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 MGME1Q9BQP7 344 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 ACPTQ9BZG2 426 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 KLHL1Q9NR64 748 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 SPATA7Q9P0W8 599 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 CFAP97Q9P2B7 532 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 CFL2Q9Y281 166 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 B3GNT3Q9Y2A9 372 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 DNMT3AQ9Y6K1 912 aaPredicted RBP14.42□□□□□ -0.1
USP38-202ENST00000510377 PRSS21Q9Y6M0 314 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 SEPT4O43236 478 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 LRG1P02750 347 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 LAMP1P11279 417 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 ANXA8P13928 327 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 CLDN8P56748 225 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 VLDLRP98155 873 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 SCARB2Q14108 478 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 TCEA2Q15560 299 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 INAVAQ3KP66 663 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 LKAAEAR1Q8TD35 194 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 TRIM63Q969Q1 353 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 OTUB1Q96FW1 271 aaPredicted RBP14.42□□□□□ -0.1
USP38-202ENST00000510377 SLC30A2Q9BRI3 323 aa14.42□□□□□ -0.1
USP38-202ENST00000510377 SLC35A5Q9BS91 424 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms