RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 ANKMY2Q8IV38 441 aa20.17■□□□□ 0.82
LIN54-208ENST00000509748 PRSS58Q8IYP2 241 aa20.17■□□□□ 0.82
LIN54-208ENST00000509748 MYO1HQ8N1T3 1032 aa20.17■□□□□ 0.82
LIN54-208ENST00000509748 RERGQ96A58 199 aaPredicted RBP20.17■□□□□ 0.82
LIN54-208ENST00000509748 TRIM31Q9BZY9 425 aa20.17■□□□□ 0.82
LIN54-208ENST00000509748 ATG10Q9H0Y0 220 aa20.17■□□□□ 0.82
LIN54-208ENST00000509748 PPANQ9NQ55 473 aaKnown RBP20.17■□□□□ 0.82
LIN54-208ENST00000509748 MOCS1Q9NZB8 636 aa20.17■□□□□ 0.82
LIN54-208ENST00000509748 RNF14Q9UBS8 474 aa20.17■□□□□ 0.82
LIN54-208ENST00000509748 PSAT1Q9Y617 370 aa20.17■□□□□ 0.82
LIN54-208ENST00000509748 KLHL41O60662 606 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 ALPPP05187 535 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 HRH2P25021 359 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 ITGA3P26006 1051 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 PAFAH1B1P43034 410 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 IL2P60568 153 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 NAE1Q13564 534 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 FAM53BQ14153 422 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 TUBB8Q3ZCM7 444 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 CRB2Q5IJ48 1285 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 TMEM207Q6UWW9 146 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 GPATCH11Q8N954 259 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 KRT12Q99456 494 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 PCBD2Q9H0N5 130 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 SLAMF7Q9NQ25 335 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 TRPC4Q9UBN4 977 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 C3orf18Q9UK00 162 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 IKZF3Q9UKT9 509 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 CORO1CQ9ULV4 474 aaPredicted RBP20.16■□□□□ 0.82
LIN54-208ENST00000509748 SNX24Q9Y343 169 aa20.16■□□□□ 0.82
LIN54-208ENST00000509748 HIVEP3Q5T1R4 2406 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 A0A0A6YYC8 382 aaPredicted RBP20.15■□□□□ 0.82
LIN54-208ENST00000509748 EFCAB8A8MWE9 144 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 I3L1I5 382 aaPredicted RBP20.15■□□□□ 0.82
LIN54-208ENST00000509748 TXNDC9O14530 226 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 IPO13O94829 963 aaKnown RBP20.15■□□□□ 0.82
LIN54-208ENST00000509748 STATHP02808 62 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 NPPBP16860 134 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 GNLYP22749 145 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 EFNA3P52797 238 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 MRPS25P82663 173 aaKnown RBP20.15■□□□□ 0.82
LIN54-208ENST00000509748 IGFL2Q6UWQ7 119 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 PARP9Q8IXQ6 854 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 SHISA5Q8N114 240 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 EFCAB3Q8N7B9 438 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 ANP32BQ92688 251 aaKnown RBP20.15■□□□□ 0.82
LIN54-208ENST00000509748 C8orf44Q96CB5 159 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 TM4SF19Q96DZ7 209 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 MMABQ96EY8 250 aaPredicted RBP20.15■□□□□ 0.82
LIN54-208ENST00000509748 PDLIM5Q96HC4 596 aaKnown RBP20.15■□□□□ 0.82
LIN54-208ENST00000509748 TGIF2Q9GZN2 237 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 DRC3Q9H069 523 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 B3GNT3Q9Y2A9 372 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 SCN3AQ9NY46 2000 aa20.15■□□□□ 0.82
LIN54-208ENST00000509748 A0A1W2PQ72 361 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 LCMT2O60294 686 aaKnown RBP20.14■□□□□ 0.81
LIN54-208ENST00000509748 RPS15AP62244 130 aaKnown RBP20.14■□□□□ 0.81
LIN54-208ENST00000509748 MGAT5Q09328 741 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 PDIA2Q13087 525 aaKnown RBP20.14■□□□□ 0.81
LIN54-208ENST00000509748 PDAP1Q13442 181 aaKnown RBP20.14■□□□□ 0.81
LIN54-208ENST00000509748 SYT16Q17RD7 645 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 FAM45BPQ6NSW5 357 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 LCTLQ6UWM7 567 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 Q6ZS92 163 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 PALM2Q8IXS6 379 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 FBXO36Q8NEA4 188 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 OR56A3Q8NH54 315 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 FAM45AQ8TCE6 357 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 C19orf60Q96EN9 201 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 MACROD1Q9BQ69 325 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 MCMBPQ9BTE3 642 aa20.14■□□□□ 0.81
LIN54-208ENST00000509748 MAST4O15021 2626 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 SPTBN1Q01082 2364 aaKnown RBP20.13■□□□□ 0.81
LIN54-208ENST00000509748 IDSB3KWA1 339 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 PRPF4O43172 522 aaKnown RBP eCLIP20.13■□□□□ 0.811e-16■■■■■ 34.3
LIN54-208ENST00000509748 VPS4BO75351 444 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 HPP00738 406 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 ACPPP15309 386 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 BCL6P41182 706 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 EMP2P54851 167 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 SBSNQ6UWP8 590 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 PRSS41Q7RTY9 318 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 ZC3HC1Q86WB0 502 aaKnown RBP20.13■□□□□ 0.81
LIN54-208ENST00000509748 C17orf64Q86WR6 236 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 ZC3H7AQ8IWR0 971 aaKnown RBP20.13■□□□□ 0.81
LIN54-208ENST00000509748 FAM26EQ8N5C1 309 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 SNRNP40Q96DI7 357 aaKnown RBP20.13■□□□□ 0.81
LIN54-208ENST00000509748 THAP11Q96EK4 314 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 OR4K3Q96R72 315 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 LHPPQ9H008 270 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 MKKSQ9NPJ1 570 aaPredicted RBP20.13■□□□□ 0.81
LIN54-208ENST00000509748 VPS4AQ9UN37 437 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 CSAG2Q9Y5P2 127 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 UTP20O75691 2785 aaKnown RBP20.13■□□□□ 0.81
LIN54-208ENST00000509748 NAV2Q8IVL1 2488 aa20.13■□□□□ 0.81
LIN54-208ENST00000509748 FEZF1A0PJY2 475 aa20.12■□□□□ 0.81
LIN54-208ENST00000509748 HIST1H2AGP0C0S8 130 aaPredicted RBP20.12■□□□□ 0.81
LIN54-208ENST00000509748 COX6A1P12074 109 aa20.12■□□□□ 0.81
LIN54-208ENST00000509748 CDH1P12830 882 aa20.12■□□□□ 0.81
LIN54-208ENST00000509748 HIST1H2ADP20671 130 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms