RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CCDC137Q6PK04 289 aaKnown RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 KLHL17Q6TDP4 642 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MOXD1Q6UVY6 613 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 C5orf46Q6UWT4 87 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MTSS1LQ765P7 747 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ANKS1BQ7Z6G8 1248 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 WDR5BQ86VZ2 330 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TRIM69Q86WT6 500 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 CCDC28AQ8IWP9 274 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 BBS7Q8IWZ6 715 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ADGRF2Q8IZF7 708 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MB21D1Q8N884 522 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MDGA1Q8NFP4 955 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 OR4C15Q8NGM1 316 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 OR10J5Q8NHC4 309 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PCDH19Q8TAB3 1148 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TGFBRAP1Q8WUH2 860 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 P3H4Q92791 437 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ABTB1Q969K4 478 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MSLNLQ96KJ4 702 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 B3GALT6Q96L58 329 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TAAR6Q96RI8 345 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MGME1Q9BQP7 344 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SEC22CQ9BRL7 303 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 CENPKQ9BS16 269 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PIMREGQ9BSJ6 248 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PKIBQ9C010 78 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SEMA4CQ9C0C4 833 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 DNTTIP1Q9H147 329 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ALX4Q9H161 411 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF768Q9H5H4 540 aaKnown RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PDZD7Q9H5P4 517 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MINDY3Q9H8M7 445 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SMURF1Q9HCE7 757 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ADAP2Q9NPF8 381 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ZDHHC4Q9NPG8 344 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ASCL3Q9NQ33 180 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TLR8Q9NR97 1041 aaKnown RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 SAMSN1Q9NSI8 373 aaKnown RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TREX1Q9NSU2 369 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 GIMAP4Q9NUV9 329 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PANK4Q9NVE7 773 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 TXNDC16Q9P2K2 825 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 MGAT4CQ9UBM8 478 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 NOCTQ9UK39 431 aaKnown RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 NUP50Q9UKX7 468 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PLEKHA6Q9Y2H5 1048 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 STRAPQ9Y3F4 350 aaKnown RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 UTYO14607 1347 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 UBE4BO95155 1302 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 PDS5AQ29RF7 1337 aaKnown RBP4.38□□□□□ -1.71
NIPBL-206ENST00000509429 KDM3AQ9Y4C1 1321 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ANKRD36BQ8N2N9 1353 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 ZFYVE9O95405 1425 aa4.38□□□□□ -1.71
NIPBL-206ENST00000509429 KIDINS220Q9ULH0 1771 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PRR23AA6NEV1 266 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 LRRC3CA6NJW4 275 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF729A6NN14 1252 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 DRGXA6NNA5 263 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 MARCH11A6NNE9 402 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 LINC00587B1AMM8 73 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 QSOX1O00391 747 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PIP5K1BO14986 540 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 TM9SF1O15321 606 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 CNOT3O75175 753 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 MBP02144 154 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 FGBP02675 491 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 IFNA6P05013 189 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 OR2T7P0C7T2 308 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 RNF224P0DH78 156 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PEPDP12955 493 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 GYPEP15421 78 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 NQO2P16083 231 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 MX1P20591 662 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 DRD5P21918 477 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 RBL1P28749 1068 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 CCND3P30281 292 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 HOXA13P31271 388 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 GGT5P36269 586 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 IGHMBP2P38935 993 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 TMPOP42166 694 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PRCPP42785 496 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PPP3CCP48454 512 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 MTNR1BP49286 362 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF143P52747 638 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 CAPZA1P52907 286 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 AP2S1P53680 142 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SNU13P55769 128 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SOX8P57073 446 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 TAS2R60P59551 318 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 DCDC1P59894 354 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 HTRA4P83105 476 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PPIGQ13427 754 aaKnown RBP eCLIP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SNTB1Q13884 538 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 VEZF1Q14119 521 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 DRAP1Q14919 205 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PCLAFQ15004 111 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 STX1AQ16623 288 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 BTBD16Q32M84 506 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms