RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CUL9Q8IWT3 2517 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 SBNO1A3KN83 1393 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 LRPPRCP42704 1394 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 KIAA0232Q92628 1395 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 NRXN1Q9ULB1 1477 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 CLTCL1P53675 1640 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 GLOD5A6NK44 160 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 MPTX1A8MV57 137 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 A8MV72 311 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 IGHV2-70P01814 119 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 EIF2DP41214 584 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 CSNK2BP67870 215 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 GUCY2DQ02846 1103 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 CALCOCO2Q13137 446 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 CBWD6Q4V339 395 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 CBWD3Q5JTY5 395 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 SLC35D3Q5M8T2 416 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 LCN1P1Q5VSP4 162 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 C11orf63Q6NUN7 778 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 UGT3A1Q6NUS8 523 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 GPRIN3Q6ZVF9 776 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 G2E3Q7L622 706 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 MMD2Q8IY49 270 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 CFAP61Q8NHU2 1237 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 SYN2Q92777 582 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 SFXN2Q96NB2 322 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 NECTIN4Q96NY8 510 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 PDE7BQ9NP56 450 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 CCDC177Q9NQR7 707 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 THEGQ9P2T0 379 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 FBXO2Q9UK22 296 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 PCDHGB4Q9UN71 923 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 TMED3Q9Y3Q3 217 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 ARHGEF10O15013 1369 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 ANKRD30AQ9BXX3 1397 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 SSH2Q76I76 1423 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 ANKRD50Q9ULJ7 1429 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 PDE4DIPQ5VU43 2346 aa4.37□□□□□ -1.71
TOPBP1-206ENST00000508524 LRRC37A3O60309 1634 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 COL24A1Q17RW2 1714 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 IGHV3OR16-10A0A075B7F0 116 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 ANKRD18BA2A2Z9 1011 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 EPHB6O15197 1021 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 SRSF10O75494 262 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 PGM3O95394 542 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 SLC2A2P11168 524 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 MATR3P43243 847 aaKnown RBP eCLIP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 CSRP3P50461 194 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 CLNS1AP54105 237 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 EIF5P55010 431 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 CYCSP99999 105 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 ELAVL2Q12926 359 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 STK4Q13043 487 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 SNAPC1Q16533 368 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 LMNTD2Q8IXW0 634 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 Q8N377 158 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 THAP8Q8NA92 274 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 APPL2Q8NEU8 664 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 APOBEC4Q8WW27 367 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 PIGBQ92521 554 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 NXNL1Q96CM4 212 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 FOXN4Q96NZ1 517 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 GOLPH3LQ9H4A5 285 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 TRPV4Q9HBA0 871 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 MYNNQ9NPC7 610 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 PRMT7Q9NVM4 692 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 MRPL15Q9P015 296 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 ZHX2Q9Y6X8 837 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 ATP7BP35670 1465 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 AGRNO00468 2067 aa4.36□□□□□ -1.71
TOPBP1-206ENST00000508524 PARP4Q9UKK3 1724 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 NEMP2A6NFY4 417 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 IDH3BO43837 385 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 PRKACGP22612 351 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 LHCGRP22888 699 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 RBMS1P29558 406 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 CSTF2P33240 577 aaKnown RBP eCLIP4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 HSPB3Q12988 150 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 RAPSNQ13702 412 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 FASTKD3Q14CZ7 662 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 LYSMD4Q5XG99 296 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 FAM198BQ6UWH4 519 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 NUP54Q7Z3B4 507 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 CATSPERDQ86XM0 798 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 Q8NBF4 154 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 OR6S1Q8NH40 331 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 MAPK15Q8TD08 544 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 JAKMIP2Q96AA8 810 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 PRICKLE1Q96MT3 831 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 TMEM5Q9Y2B1 443 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 OVOS2A0A0G2JMS6 1433 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 OVOS2A0A0J9YW53 1432 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 OVOS2Q6IE36 1432 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 LMO7Q8WWI1 1683 aa4.35□□□□□ -1.71
TOPBP1-206ENST00000508524 A0A1W2PPQ1 181 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 A0A1W2PPR1 153 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 TRUB2O95900 331 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 PFKFB1P16118 471 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 LBX1P52954 281 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms