RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 TEX264Q9Y6I9 313 aa13.58□□□□□ -0.24
RAB28-205ENST00000508274 SPTAN1Q13813 2472 aaKnown RBP13.57□□□□□ -0.24
RAB28-205ENST00000508274 HIVEP3Q5T1R4 2406 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 TCP11X1B4DZS4 312 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 IPO13O94829 963 aaKnown RBP13.57□□□□□ -0.24
RAB28-205ENST00000508274 C8GP07360 202 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 SLC26A3P40879 764 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 EFNA3P52797 238 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 MAT1AQ00266 395 aaKnown RBP13.57□□□□□ -0.24
RAB28-205ENST00000508274 RELAQ04206 551 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 DSG2Q14126 1118 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 FASTKD3Q14CZ7 662 aaKnown RBP13.57□□□□□ -0.24
RAB28-205ENST00000508274 ZXDCQ2QGD7 858 aaPredicted RBP13.57□□□□□ -0.24
RAB28-205ENST00000508274 HECTD2Q5U5R9 776 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 FAAH2Q6GMR7 532 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 LRRC8EQ6NSJ5 796 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 SYDE1Q6ZW31 735 aaPredicted RBP13.57□□□□□ -0.24
RAB28-205ENST00000508274 PRSS41Q7RTY9 318 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 VN1R4Q7Z5H5 301 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 ANKMY2Q8IV38 441 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 PDIK1LQ8N165 341 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 MYO1HQ8N1T3 1032 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 AMER2Q8N7J2 671 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 GABPB2Q8TAK5 448 aaPredicted RBP13.57□□□□□ -0.24
RAB28-205ENST00000508274 MCOLN3Q8TDD5 553 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 MVB12AQ96EY5 273 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 THOC3Q96J01 351 aaKnown RBP13.57□□□□□ -0.24
RAB28-205ENST00000508274 CCDC138Q96M89 665 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 DRC3Q9H069 523 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 ILKAPQ9H0C8 392 aaPredicted RBP13.57□□□□□ -0.24
RAB28-205ENST00000508274 PARVBQ9HBI1 364 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 ZNF160Q9HCG1 818 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 PSAT1Q9Y617 370 aa13.57□□□□□ -0.24
RAB28-205ENST00000508274 MAP2K7O14733 419 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 SEC31AO94979 1220 aaKnown RBP13.56□□□□□ -0.24
RAB28-205ENST00000508274 ACPPP15309 386 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 CSNK1G2P78368 415 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 MRPS25P82663 173 aaKnown RBP13.56□□□□□ -0.24
RAB28-205ENST00000508274 SP140Q13342 867 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
RAB28-205ENST00000508274 NAE1Q13564 534 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 GARNL3Q5VVW2 1013 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 ATG9BQ674R7 924 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 STEAP4Q687X5 459 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 AGTRAPQ6RW13 159 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 GALNT7Q86SF2 657 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 CUZD1Q86UP6 607 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 IQCKQ8N0W5 287 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 ZADH2Q8N4Q0 377 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 CISD2Q8N5K1 135 aaKnown RBP13.56□□□□□ -0.24
RAB28-205ENST00000508274 TMEM184CQ9NVA4 438 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 ASF1BQ9NVP2 202 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 IKZF3Q9UKT9 509 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 CDC14AQ9UNH5 594 aa13.56□□□□□ -0.24
RAB28-205ENST00000508274 MAST4O15021 2626 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 ICE1Q9Y2F5 2266 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 FEZF1A0PJY2 475 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 IDSB3KWA1 339 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 HPP00738 406 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 ANXA5P08758 320 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 COX6A1P12074 109 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 FDXRP22570 491 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 EEF1A2Q05639 463 aaKnown RBP13.55□□□□□ -0.24
RAB28-205ENST00000508274 AGAP7PQ5VUJ5 663 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 Q6ZS92 163 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 PALM2Q8IXS6 379 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 OR9A4Q8NGU2 314 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 TM9SF4Q92544 642 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 PYCR2Q96C36 320 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 SNF8Q96H20 258 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 RUNDC3BQ96NL0 473 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 AGAP4Q96P64 663 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 LHPPQ9H008 270 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 NTNG1Q9Y2I2 539 aa13.55□□□□□ -0.24
RAB28-205ENST00000508274 SPTBN1Q01082 2364 aaKnown RBP13.55□□□□□ -0.24
RAB28-205ENST00000508274 BLACEA4D250 179 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 TXNDC9O14530 226 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 SLC16A5O15375 505 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 PRPF4O43172 522 aaKnown RBP eCLIP13.54□□□□□ -0.24
RAB28-205ENST00000508274 LCMT2O60294 686 aaKnown RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 KLHL41O60662 606 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 SEMA7AO75326 666 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 JRKO75564 520 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 CELA2AP08217 269 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 RNF224P0DH78 156 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 CDH1P12830 882 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 BCL6P41182 706 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 RPL21P46778 160 aaKnown RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 EMP2P54851 167 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 ARL4CP56559 192 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 IL2P60568 153 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 RPS15AP62244 130 aaKnown RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 FAM53BQ14153 422 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 NR6A1Q15406 480 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 CRB2Q5IJ48 1285 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 FAM45BPQ6NSW5 357 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 IGFL2Q6UWQ7 119 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 TMEM207Q6UWW9 146 aa13.54□□□□□ -0.24
RAB28-205ENST00000508274 ZC3H7AQ8IWR0 971 aaKnown RBP13.54□□□□□ -0.24
RAB28-205ENST00000508274 FBXO36Q8NEA4 188 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms