RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 PRPSAP1Q14558 356 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 FBXO42Q6P3S6 717 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 PACS1Q6VY07 963 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 LANCL3Q6ZV70 420 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 PRIMA1Q86XR5 153 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 KATNAL2Q8IYT4 538 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 SYCE1Q8N0S2 351 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 CPSF7Q8N684 471 aaKnown RBP13.11□□□□□ -0.31
DDR1-260ENST00000507533 OR2L3Q8NG85 312 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 RMND5BQ96G75 393 aaPredicted RBP13.11□□□□□ -0.31
DDR1-260ENST00000507533 CDKN2AIPNLQ96HQ2 116 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 CYTH2Q99418 400 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 OLFM1Q99784 485 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 ZFYVE21Q9BQ24 234 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 TBL1YQ9BQ87 522 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 C10orf88Q9H8K7 445 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 GUCA1BQ9UMX6 200 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 A0A0A6YYC8 382 aaPredicted RBP13.1□□□□□ -0.31
DDR1-260ENST00000507533 USP27XA6NNY8 438 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 I3L1I5 382 aaPredicted RBP13.1□□□□□ -0.31
DDR1-260ENST00000507533 CTNNA2P26232 953 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 PSMB4P28070 264 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 RBL1P28749 1068 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 ADSLP30566 484 aaPredicted RBP13.1□□□□□ -0.31
DDR1-260ENST00000507533 CCR7P32248 378 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 SPARCL1Q14515 664 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 HKDC1Q2TB90 917 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 CLEC9AQ6UXN8 241 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 UNC5DQ6UXZ4 953 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 RCOR2Q8IZ40 523 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 CSNK1A1LQ8N752 337 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 KRT35Q92764 455 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 C18orf12Q96KH6 178 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 RAB11FIP5Q9BXF6 653 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 VN1R1Q9GZP7 353 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 ARNT2Q9HBZ2 717 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 LRFN1Q9P244 771 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 C19orf25Q9UFG5 118 aaPredicted RBP13.1□□□□□ -0.31
DDR1-260ENST00000507533 AMFRQ9UKV5 643 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 RUVBL1Q9Y265 456 aaKnown RBP13.1□□□□□ -0.31
DDR1-260ENST00000507533 PPP2R2CQ9Y2T4 447 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 PCDHA3Q9Y5H8 950 aa13.1□□□□□ -0.31
DDR1-260ENST00000507533 OR2A25A4D2G3 310 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 FOXS1O43638 330 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
DDR1-260ENST00000507533 MARCKSL1P49006 195 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 HCFC1P51610 2035 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 YBX1P67809 324 aaKnown RBP13.09□□□□□ -0.31
DDR1-260ENST00000507533 MAT1AQ00266 395 aaKnown RBP13.09□□□□□ -0.31
DDR1-260ENST00000507533 PMPCAQ10713 525 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 MFSD4BQ5TF39 518 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 LRRC8BQ6P9F7 803 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 TTC23LQ6PF05 361 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 PEX26Q7Z412 305 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 ZZZ3Q8IYH5 903 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 RPRMLQ8N4K4 120 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 OR2A1Q8NGT9 310 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 M1APQ8TC57 530 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 ARSGQ96EG1 525 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 SEC16BQ96JE7 1060 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 GPATCH1Q9BRR8 931 aaKnown RBP13.09□□□□□ -0.31
DDR1-260ENST00000507533 DPH7Q9BTV6 452 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 CLEC4MQ9H2X3 399 aaPredicted RBP13.09□□□□□ -0.31
DDR1-260ENST00000507533 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
DDR1-260ENST00000507533 KCNF1Q9H3M0 494 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 FEZ2Q9UHY8 353 aaPredicted RBP13.09□□□□□ -0.31
DDR1-260ENST00000507533 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
DDR1-260ENST00000507533 NSD1Q96L73 2696 aaPredicted RBP13.08□□□□□ -0.31
DDR1-260ENST00000507533 OR51F1A6NGY5 319 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 MIF4GDA9UHW6 222 aaKnown RBP13.08□□□□□ -0.32
DDR1-260ENST00000507533 F8W8V4 182 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 H7C0C1 242 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 TFECO14948 347 aaPredicted RBP13.08□□□□□ -0.32
DDR1-260ENST00000507533 NME2P1O60361 137 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 OR1I1O60431 355 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 CDC40O60508 579 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDR1-260ENST00000507533 VPS26AO75436 327 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 GPC4O75487 556 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 SLC25A12O75746 678 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 INHBBP09529 407 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 TPH1P17752 444 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 NME2P22392 152 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 MSNP26038 577 aaKnown RBP13.08□□□□□ -0.32
DDR1-260ENST00000507533 ATP5OP48047 213 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 GTF3C1Q12789 2109 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 EXT1Q16394 746 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 MINDY4Q4G0A6 757 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 ANKRD20A2Q5SQ80 823 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 ANKRD20A1Q5TYW2 823 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 ZNF468Q5VIY5 522 aaPredicted RBP13.08□□□□□ -0.32
DDR1-260ENST00000507533 ANKRD20A3Q5VUR7 823 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 GARNL3Q5VVW2 1013 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 CAMKMTQ7Z624 323 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 CCDC50Q8IVM0 306 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 RAB42Q8N4Z0 105 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 SLC5A8Q8N695 610 aa13.08□□□□□ -0.32
DDR1-260ENST00000507533 WFDC11Q8NEX6 87 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms