RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PLD3Q8IV08 490 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 LINC01555Q8NAE3 123 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 ZNF548Q8NEK5 533 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 ADCY4Q8NFM4 1077 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 SLC5A11Q8WWX8 675 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 FCRL1Q96LA6 429 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 HHIPQ96QV1 700 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 FGF22Q9HCT0 170 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 TMEM45AQ9NWC5 275 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 PCDHGA11Q9Y5H2 935 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 AP4B1Q9Y6B7 739 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 A0A1B0GTW7 788 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 FEZF1A0PJY2 475 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 NPIPB8E9PQR5 432 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 STAMBPO95630 424 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 LYNP07948 512 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 NELFEP18615 380 aaKnown RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 CASP9P55211 416 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 PRKCQQ04759 706 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 E2F2Q14209 437 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 FXNQ16595 210 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 ZNF385BQ569K4 471 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 PRAMEF14Q5SWL7 426 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 PRAMEF13Q5VWM6 474 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 NXPE4Q6UWF7 544 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 MTSS1LQ765P7 747 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 OXR1Q8N573 874 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 OR2T12Q8NG77 320 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 RPLP0P6Q8NHW5 317 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 SH3KBP1Q96B97 665 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 C12orf66Q96MD2 445 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 CPPED1Q9BRF8 314 aaPredicted RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 KCNK12Q9HB15 430 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 IMP3Q9NV31 184 aaKnown RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 ARMC1Q9NVT9 282 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 DYRK1BQ9Y463 629 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 GABRR3A8MPY1 467 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 ANXA4P09525 319 aaPredicted RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 COX7A2P14406 83 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 PSMA4P25789 261 aaKnown RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 RPS21P63220 83 aaKnown RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 MRPS35P82673 323 aaKnown RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 PRSS53Q2L4Q9 553 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 GPR180Q86V85 440 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 DCUN1D3Q8IWE4 304 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 OR8J3Q8NGG0 315 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 OR5K2Q8NHB8 316 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 FBXO30Q8TB52 745 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 CHTF18Q8WVB6 975 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 RAD51AP1Q96B01 352 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 TESCQ96BS2 214 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 MRGPRX1Q96LB2 322 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 CNBD2Q96M20 576 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 VCX3BQ9H321 246 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 KAT8Q9H7Z6 458 aaKnown RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 DMRT3Q9NQL9 472 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 PRDM8Q9NQV8 689 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 AGPAT4Q9NRZ5 378 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 SCHIP1Q9P0W5 487 aaPredicted RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 PCDHB3Q9Y5E6 796 aa11.74□□□□□ -0.53
LIN54-206ENST00000506560 MAGED1Q9Y5V3 778 aaPredicted RBP11.74□□□□□ -0.53
LIN54-206ENST00000506560 GNG14A0A1W2PPG7 69 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 A0A1W2PPV9 198 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 SERTM1A2A2V5 107 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 RTCAO00442 366 aaKnown RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 PLOD2O00469 737 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 CPSF4O95639 269 aaKnown RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 EML2O95834 649 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 NPPAP01160 153 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 GGT1P19440 569 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 KIR3DL1P43629 444 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 PCDH1Q08174 1060 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 MED21Q13503 144 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 ATG9BQ674R7 924 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 KIAA1324Q6UXG2 1013 aaKnown RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 HORMAD1Q86X24 394 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 CCL4L1Q8NHW4 92 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 SIPA1Q96FS4 1042 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 RNF145Q96MT1 663 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 DPH2Q9BQC3 489 aaPredicted RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 ITM2CQ9NQX7 267 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 C2orf42Q9NWW7 574 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 CD207Q9UJ71 328 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 INVSQ9Y283 1065 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 TMED5Q9Y3A6 229 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 GPSM3Q9Y4H4 160 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 COL4A2P08572 1712 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 C15orf38-AP3S2A0A0A6YYH1 394 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 H7BY64 318 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 RFXANKO14593 260 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 KMOO15229 486 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 NDUFV2P19404 249 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 GZMMP51124 257 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 PPP1R8Q12972 351 aaKnown RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 PDK3Q15120 406 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 LRIF1Q5T3J3 769 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 UNC5DQ6UXZ4 953 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 RD3Q7Z3Z2 195 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 COMMD6Q7Z4G1 85 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms