RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MYBPHLA2RUH7 354 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 OR6C70A6NIJ9 312 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 H3BRB1 525 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 BET1O15155 118 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 ADAMDEC1O15204 470 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 CPNE3O75131 537 aaKnown RBP15.4■□□□□ 0.06
SCLT1-208ENST00000506368 PTHP01270 115 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 DARSP14868 501 aaKnown RBP15.4■□□□□ 0.06
SCLT1-208ENST00000506368 MAPK1P28482 360 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 ZNF140P52738 457 aaPredicted RBP15.4■□□□□ 0.06
SCLT1-208ENST00000506368 RHAGQ02094 409 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 IRF5Q13568 498 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 PTPRNQ16849 979 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 TRIM60Q495X7 471 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 FBXO48Q5FWF7 155 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 ZNF782Q6ZMW2 699 aaPredicted RBP15.4■□□□□ 0.06
SCLT1-208ENST00000506368 DPY19L3Q6ZPD9 716 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 ATCAYQ86WG3 371 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 ESX1Q8N693 406 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 NATD1Q8N6N6 113 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 TRPV1Q8NER1 839 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 CD200R1Q8TD46 325 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 C16orf70Q9BSU1 422 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 SLC29A3Q9BZD2 475 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 ZYG11BQ9C0D3 744 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 IPPKQ9H8X2 491 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 SEC14L4Q9UDX3 406 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 CMAHPQ9Y471 501 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 HS3ST4Q9Y661 456 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 A0A1W2PQ09 198 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 A8MV72 311 aaPredicted RBP15.4■□□□□ 0.06
SCLT1-208ENST00000506368 B4DXG7 233 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 ULK1O75385 1050 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 GLUD1P00367 558 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 STSP08842 583 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 GABRB1P18505 474 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 RPS14P62263 151 aaKnown RBP15.4■□□□□ 0.06
SCLT1-208ENST00000506368 CACNB2Q08289 660 aaPredicted RBP15.4■□□□□ 0.06
SCLT1-208ENST00000506368 ST3GAL4Q11206 333 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 EFR3AQ14156 821 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 ZNF79Q15937 498 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 MARCH8Q5T0T0 291 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 DEDD2Q8WXF8 326 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 AP2M1Q96CW1 435 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 HMCESQ96FZ2 354 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 FYTTD1Q96QD9 318 aaKnown RBP15.4■□□□□ 0.06
SCLT1-208ENST00000506368 KCNS3Q9BQ31 491 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 AIFM2Q9BRQ8 373 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 KATNBL1Q9H079 304 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 GOLGA2P5Q9HBQ8 144 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 PHF11Q9UIL8 331 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 PADI2Q9Y2J8 665 aa15.4■□□□□ 0.06
SCLT1-208ENST00000506368 RGS5O15539 181 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 GPR32O75388 356 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 EPN2O95208 641 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ITGB1P05556 798 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 EBLN1P0CF75 366 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ZNF30P17039 623 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 CTRB1P17538 263 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ITGB6P18564 788 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 PTPN6P29350 595 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 GRK4P32298 578 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 PIK3CGP48736 1102 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 VLDLRP98155 873 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 TAF1AQ15573 450 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 GTDC1Q4AE62 458 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 GJC2Q5T442 439 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ALG1LQ6GMV1 187 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 CTRB2Q6GPI1 263 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ZNF467Q7Z7K2 595 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 STK40Q8N2I9 435 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ARRDC4Q8NCT1 418 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ENKURQ8TC29 256 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 DNAJA4Q8WW22 397 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 UBE2FQ969M7 185 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 MAP6Q96JE9 813 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 HSH2DQ96JZ2 352 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 BBS2Q9BXC9 721 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ASPNQ9BXN1 380 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 PRDM5Q9NQX1 630 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 MUTYHQ9UIF7 546 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ZNF490Q9ULM2 529 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 A0A0X1KG70 313 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 J3KR12 359 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 hCG_2039718K7EN88 272 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 CDK2AP1O14519 115 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 HCN1O60741 890 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 OR2B3O76000 313 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 TPPPO94811 219 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 INHAP05111 366 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 SCG5P05408 212 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 GPX2P18283 190 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 CCND3P30281 292 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 LAPTM4AQ15012 233 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 BAK1Q16611 211 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 GLYR1Q49A26 553 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 EEF1AKMT1Q8WVE0 214 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 NELL1Q92832 810 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms