RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ZNF33BQ06732 778 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 TSTA3Q13630 321 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 KCNJ11Q14654 390 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 NAA30Q147X3 362 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 TMED2Q15363 201 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 C3AR1Q16581 482 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 ZNF630Q2M218 657 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 KLHL38Q2WGJ6 581 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 AARS2Q5JTZ9 985 aaKnown RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 PCID2Q5JVF3 399 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 ICE2Q659A1 982 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 HIBCHQ6NVY1 386 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 TTC23LQ6PF05 361 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 TMEM207Q6UWW9 146 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 NEK10Q6ZWH5 1172 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 CENPUQ71F23 418 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 VN1R4Q7Z5H5 301 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 KIAA1328Q86T90 577 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 SLC13A5Q86YT5 568 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 LRRC56Q8IYG6 542 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 MPP5Q8N3R9 675 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 UBL4BQ8N7F7 174 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 OR9A1PQ8NGU1 263 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 OR9A4Q8NGU2 314 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 GIMAP7Q8NHV1 300 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 ADAMTS18Q8TE60 1221 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 ZNF480Q8WV37 535 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 LPGAT1Q92604 370 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 PEX13Q92968 403 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 MMABQ96EY8 250 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 CCDC138Q96M89 665 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 SIGLEC12Q96PQ1 595 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 PANX3Q96QZ0 392 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 PKP4Q99569 1192 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 PLCD4Q9BRC7 762 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 TSSK1BQ9BXA7 367 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 TRIM8Q9BZR9 551 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 TGIF2Q9GZN2 237 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.54□□□□□ -1.52
GYPB-205ENST00000505583 ZNF700Q9H0M5 742 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 TSPAN10Q9H1Z9 355 aaPredicted RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 MRPS30Q9NP92 439 aaKnown RBP5.54□□□□□ -1.52
GYPB-205ENST00000505583 ABCF3Q9NUQ8 709 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 ZNF358Q9NW07 568 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 SYBUQ9NX95 663 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 ANKRD10Q9NXR5 420 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 SPATA7Q9P0W8 599 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 SEC14L3Q9UDX4 400 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 TAC3Q9UHF0 121 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 GNPTGQ9UJJ9 305 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 TINAGQ9UJW2 476 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 ANAPC5Q9UJX4 755 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 SH2B3Q9UQQ2 575 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 ZNF148Q9UQR1 794 aa5.54□□□□□ -1.52
GYPB-205ENST00000505583 OR5H15A6NDH6 313 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 E7ENX8 843 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 F8W8V4 182 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 H7BY64 318 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 HAT1O14929 419 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 KPNA5O15131 536 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 SIAH2O43255 324 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 SLC19A2O60779 497 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 PRAMEF2O60811 474 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 DNAJB6O75190 326 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 AVILO75366 819 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 WFS1O76024 890 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 RASAL1O95294 804 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 IPO7O95373 1038 aaKnown RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 ERVK-10P10266 1014 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 FDXRP22570 491 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 RPA3P35244 121 aaPredicted RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 PPARGP37231 505 aaPredicted RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 CCNFP41002 786 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 KIR3DL1P43629 444 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 KCNJ1P48048 391 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 CLCN7P51798 805 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 TERF1P54274 439 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 PNLIPRP1P54315 467 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 TAP2Q03519 686 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 PRDX1Q06830 199 aaKnown RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 DHX9Q08211 1270 aaKnown RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 CUL1Q13616 776 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 INAQ16352 499 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 ZXDCQ2QGD7 858 aaPredicted RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 TYSND1Q2T9J0 566 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 SKOR2Q2VWA4 1001 aaPredicted RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 ANKRD20A4Q4UJ75 823 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 ABHD17BQ5VST6 288 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 ALKBH2Q6NS38 261 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 ZNF549Q6P9A3 640 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 BNC2Q6ZN30 1099 aaPredicted RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 RIPOR1Q6ZS17 1223 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 LRRC6Q86X45 466 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 PDSS2Q86YH6 399 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 CHERPQ8IWX8 916 aaKnown RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 REXO1L1PQ8IX06 675 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 SYCE1Q8N0S2 351 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 BEST3Q8N1M1 668 aa5.53□□□□□ -1.52
GYPB-205ENST00000505583 ZNF808Q8N4W9 903 aaPredicted RBP5.53□□□□□ -1.52
GYPB-205ENST00000505583 GSDMBQ8TAX9 411 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms