RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 NR1D2Q14995 579 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 HERC3Q15034 1050 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 TEAD4Q15561 434 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 SMU1Q2TAY7 513 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 PDCD4Q53EL6 469 aaKnown RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 SGO1Q5FBB7 561 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 NXNQ6DKJ4 435 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 FCRL6Q6DN72 434 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 MED27Q6P2C8 311 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 ASRGL1Q7L266 308 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 ZNF438Q7Z4V0 828 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 TRIM73Q86UV7 250 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 MYLK4Q86YV6 388 aaPredicted RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 RBM12BQ8IXT5 1001 aaKnown RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 SLC35F3Q8IY50 421 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 HUS1BQ8NHY5 278 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 SAP25Q8TEE9 199 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 CREB3L4Q8TEY5 395 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 NUDT8Q8WV74 236 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 SELENOMQ8WWX9 145 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 PIGKQ92643 395 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 MTFMTQ96DP5 389 aaKnown RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 TEX37Q96LM6 180 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 C1orf50Q9BV19 199 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 IL21RQ9HBE5 538 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 SDR39U1Q9NRG7 319 aaPredicted RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 SUSD2Q9UGT4 822 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 G3BP2Q9UN86 482 aaKnown RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 SNX6Q9UNH7 406 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 DLGAP4Q9Y2H0 992 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 PCDHGA2Q9Y5H1 932 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 CSNK1G3Q9Y6M4 447 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 CAPN7Q9Y6W3 813 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 GPR179Q6PRD1 2367 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 CABIN1Q9Y6J0 2220 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 FEZF1A0PJY2 475 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 OR2A25A4D2G3 310 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 OR6C74A6NCV1 312 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 ASPDHA6ND91 283 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 OR5K3A6NET4 321 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 H7BY64 318 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 FOXE1O00358 373 aaPredicted RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 CASC3O15234 703 aaKnown RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 TNFSF14O43557 240 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 HSD3B1P14060 373 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 AMD1P17707 334 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 NCF2P19878 526 aaPredicted RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 TACR1P25103 407 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 HSD3B2P26439 372 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 PRDX6P30041 224 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 ADSLP30566 484 aaPredicted RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 CPOXP36551 454 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 ARL1P40616 181 aaPredicted RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 BCL6P41182 706 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 GRIA3P42263 894 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 CCR8P51685 355 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 PRSS12P56730 875 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 RPS13P62277 151 aaKnown RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 RPL38P63173 70 aaKnown RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 ABATP80404 500 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 TSTA3Q13630 321 aaPredicted RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 KIR2DS3Q14952 304 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 NR6A1Q15406 480 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 ZIC1Q15915 447 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 AP5B1Q2VPB7 878 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 C14orf28Q4W4Y0 310 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 SLC23A3Q6PIS1 610 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 RINLQ6ZS11 566 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 GK5Q6ZS86 529 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 VN1R4Q7Z5H5 301 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 SPATA19Q7Z5L4 167 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 SLC9B2Q86UD5 537 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 PLD3Q8IV08 490 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 POU5F2Q8N7G0 328 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 GBP7Q8N8V2 638 aaPredicted RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 CMTM7Q96FZ5 175 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 PRAP1Q96NZ9 151 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 MTERF1Q99551 399 aaKnown RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 MS4A8Q9BY19 250 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 SRMSQ9H3Y6 488 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 ELOVL6Q9H5J4 265 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 BRF2Q9HAW0 419 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 LRTM1Q9HBL6 345 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 LHX9Q9NQ69 397 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 RIC8BQ9NVN3 520 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 SIRT5Q9NXA8 310 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 ACTR10Q9NZ32 417 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 PILRAQ9UKJ1 303 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 ZMIZ1Q9ULJ6 1067 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 KLHL20Q9Y2M5 609 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 POLR3HQ9Y535 204 aaPredicted RBP9.97□□□□□ -0.81
TPM3-217ENST00000504663 PCDHGA11Q9Y5H2 935 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 RNF215Q9Y6U7 377 aa9.97□□□□□ -0.81
TPM3-217ENST00000504663 TRBC2A0A5B9 178 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 ANKRD65E5RJM6 399 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 TRIM38O00635 465 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 FBP2O00757 339 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 RGS14O43566 566 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 ANXA6P08133 673 aa9.96□□□□□ -0.82
TPM3-217ENST00000504663 G6PDP11413 515 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms