RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FAM122AQ96E09 287 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 EGLN2Q96KS0 407 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 PRRC1Q96M27 445 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 CLIC6Q96NY7 704 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 INPP4AQ96PE3 977 aaPredicted RBP5□□□□□ -1.61
NIPBL-204ENST00000504430 TMEM209Q96SK2 561 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 KCNS3Q9BQ31 491 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 ACTRT3Q9BYD9 372 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 ANKRD60Q9BZ19 345 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 FN3KQ9H479 309 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 AGO3Q9H9G7 860 aaKnown RBP5□□□□□ -1.61
NIPBL-204ENST00000504430 CD8B2A6NJW9 211 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 OR5K4A6NMS3 321 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 H0YGN5 161 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 NR5A2O00482 541 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 FPR3P25089 353 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 MARCKSP29966 332 aaPredicted RBP5□□□□□ -1.61
NIPBL-204ENST00000504430 HOXC9P31274 260 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 RRM2P31350 389 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 ETV4P43268 484 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 TMPRSS3P57727 454 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 CBX1P83916 185 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 MERTKQ12866 999 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 CMPK2Q5EBM0 449 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 MEPCEQ7L2J0 689 aaKnown RBP5□□□□□ -1.61
NIPBL-204ENST00000504430 IGFN1Q86VF2 1251 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 SMG7Q92540 1137 aaKnown RBP5□□□□□ -1.61
NIPBL-204ENST00000504430 TANKQ92844 425 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 SPATA25Q9BR10 227 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 SH2D3AQ9BRG2 576 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 UBAC1Q9BSL1 405 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 LRRC19Q9H756 370 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 DNAJC4Q9NNZ3 241 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 CHRAC1Q9NRG0 131 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 PHPT1Q9NRX4 125 aaPredicted RBP5□□□□□ -1.61
NIPBL-204ENST00000504430 STK17AQ9UEE5 414 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 B3GALT5Q9Y2C3 310 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 CLIC4Q9Y696 253 aa5□□□□□ -1.61
NIPBL-204ENST00000504430 A0A1W2PPC1 479 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 USP17L23D6RBM5 183 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PSIP1O75475 530 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PDE9AO76083 593 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CD22P20273 847 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 GLDCP23378 1020 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 LIMS1P48059 325 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 E2F1Q01094 437 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 ART3Q13508 389 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PDK3Q15120 406 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PDCD4Q53EL6 469 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF470Q6ECI4 717 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PTRHD1Q6GMV3 140 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 C8orf74Q6P047 294 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 FIGLAQ6QHK4 219 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CYP4Z1Q86W10 505 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CCDC25Q86WR0 208 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 ADGRG5Q8IZF4 528 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 ZCCHC9Q8N567 271 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 OVCA2Q8WZ82 227 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 RAB1CQ92928 201 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 LENG9Q96B70 501 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 COQ10AQ96MF6 247 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF317Q96PQ6 595 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 LRRC1Q9BTT6 524 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 RIMS4Q9H426 269 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 UPF2Q9HAU5 1272 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 Q9N2J8 555 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 NXF1Q9UBU9 619 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 SEC14L3Q9UDX4 400 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PKP3Q9Y446 797 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 NINLQ9Y2I6 1382 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 DDTLA6NHG4 134 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 UPK3AO75631 287 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 TFP02787 698 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 AKR1A1P14550 325 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CREB1P16220 341 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 MAGP20916 626 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 DRD4P21917 467 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CXCR3P49682 368 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 DGKQP52824 942 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 YWHAEP62258 255 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 RPS15P62841 145 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 DSC1Q08554 894 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 MSLNQ13421 630 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 RPE65Q16518 533 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 RNF151Q2KHN1 245 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 NT5DC1Q5TFE4 455 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CES5AQ6NT32 575 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 C19orf35Q6ZS72 473 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 TMPRSS12Q86WS5 348 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 FAM114A1Q8IWE2 563 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PYROXD2Q8N2H3 581 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 AMER2Q8N7J2 671 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 BOLLQ8N9W6 283 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 FAM71CQ8NEG0 241 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 HAS2Q92819 552 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 COPG2Q9UBF2 871 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PLEKHB1Q9UF11 243 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 SIX4Q9UIU6 781 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 EXO1Q9UQ84 846 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 FOXA2Q9Y261 457 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms