RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MAP2K7O14733 419 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 P2RX6O15547 441 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 FOXS1O43638 330 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 HPP00738 406 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 CCND1P24385 295 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 VARSP26640 1264 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 UQCRFS1P47985 274 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 IL2P60568 153 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 RPS15AP62244 130 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 PDIA2Q13087 525 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 DSG2Q14126 1118 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 FAM53BQ14153 422 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 NDUFA9Q16795 377 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 PHKG1Q16816 387 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 PRR30Q53SZ7 412 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 VWA2Q5GFL6 755 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 HECTD2Q5U5R9 776 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 IRAK1BP1Q5VVH5 260 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 STEAP4Q687X5 459 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 TRMT10BQ6PF06 316 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 AGTRAPQ6RW13 159 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 IGFL3Q6UXB1 125 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 C17orf64Q86WR6 236 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 PLD3Q8IV08 490 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 ANKMY2Q8IV38 441 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 PARP9Q8IXQ6 854 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 IQCKQ8N0W5 287 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 ZADH2Q8N4Q0 377 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 ARHGEF39Q8N4T4 335 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 FAM26EQ8N5C1 309 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 AMER3Q8N944 861 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 OR11G2Q8NGC1 345 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 ALKBH8Q96BT7 664 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 TRIM54Q9BYV2 358 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 LHPPQ9H008 270 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 DRC3Q9H069 523 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 ILKAPQ9H0C8 392 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 PCBD2Q9H0N5 130 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 C14orf105Q9NVL8 296 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 ZFATQ9P243 1243 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 TRPC4Q9UBN4 977 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 C3orf18Q9UK00 162 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 VWA7Q9Y334 891 aa8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 UBR5O95071 2799 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 FEZF1A0PJY2 475 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 CLEC18AA5D8T8 446 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 IDSB3KWA1 339 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 NDC80O14777 642 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 FFAR3O14843 346 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 GPR42O15529 346 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 TSPAN12O95859 305 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 ACPPP15309 386 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 FDXRP22570 491 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 GNLYP22749 145 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 CXCR2P25025 360 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 GRK3P35626 688 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 SLC26A3P40879 764 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 RPL21P46778 160 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 AVPR1BP47901 424 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 PGGT1BP53609 377 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 EMP2P54851 167 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 AP1S2P56377 157 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 CSNK1G2P78368 415 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 SRSF1Q07955 248 aaKnown RBP eCLIP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 MGAT5Q09328 741 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 NAE1Q13564 534 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 FRG1Q14331 258 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 PLEKHN1Q494U1 663 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 AGAP7PQ5VUJ5 663 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 ATG9BQ674R7 924 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 CAPN13Q6MZZ7 669 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 LCTLQ6UWM7 567 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 CLEC18BQ6UXF7 455 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 LAPTM4BQ86VI4 370 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 CLEC18CQ8NCF0 446 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 BBOF1Q8ND07 529 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 FBXO36Q8NEA4 188 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 PPP4R1Q8TF05 950 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 C8orf44Q96CB5 159 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 SNRNP40Q96DI7 357 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 THAP11Q96EK4 314 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 THOC3Q96J01 351 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 AGAP4Q96P64 663 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 KRT12Q99456 494 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 OLFM1Q99784 485 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 MESP1Q9BRJ9 268 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 SGPP1Q9BX95 441 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 SLC29A3Q9BZD2 475 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 TGIF2Q9GZN2 237 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 EPS8L2Q9H6S3 715 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 ZBTB20Q9HC78 741 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 MKKSQ9NPJ1 570 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 ARL15Q9NXU5 204 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 SH2B3Q9UQQ2 575 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 SNX24Q9Y343 169 aa8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 SPENQ96T58 3664 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-207ENST00000498212 KCNE1BA0A087WTH5 132 aa8.04□□□□□ -1.12
HMGXB4-207ENST00000498212 NSG1A0A0A6YYJ2 146 aa8.04□□□□□ -1.12
HMGXB4-207ENST00000498212 TCP11X1B4DZS4 312 aa8.04□□□□□ -1.12
HMGXB4-207ENST00000498212 E7ESA3 106 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms