RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 A0A1W2PPV9 198 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 CCDC162PA2VCL2 907 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 MROH6A6NGR9 719 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 TFECO14948 347 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-207ENST00000498117 AKR1B10O60218 316 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 KLK8O60259 260 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 NME2P1O60361 137 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 MAN1A2O60476 641 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 C1orf105O95561 183 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 PKMP14618 531 aaKnown RBP11.92□□□□□ -0.5
TRIM27-207ENST00000498117 NME2P22392 152 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 AOAHP28039 575 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 DGKQP52824 942 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 TMED2Q15363 201 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 NDUFA9Q16795 377 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 ASTE1Q2TB18 679 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-207ENST00000498117 BBS12Q6ZW61 710 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 ACAD11Q709F0 780 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 CCDC71Q8IV32 467 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-207ENST00000498117 CDKL3Q8IVW4 592 aaPredicted RBP11.92□□□□□ -0.5
TRIM27-207ENST00000498117 KATNAL2Q8IYT4 538 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 MAGEC3Q8TD91 643 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 PLCD4Q9BRC7 762 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 HEMGNQ9BXL5 484 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 LIME1Q9H400 295 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 MRPS30Q9NP92 439 aaKnown RBP11.92□□□□□ -0.5
TRIM27-207ENST00000498117 ZNF358Q9NW07 568 aa11.92□□□□□ -0.5
TRIM27-207ENST00000498117 CSPG4Q6UVK1 2322 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 IQCF5A8MTL0 148 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 PROM1O43490 865 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 PRMT3O60678 531 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 GYPCP04921 128 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 CCNFP41002 786 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 CYB561P49447 251 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 YBX1P67809 324 aaKnown RBP11.91□□□□□ -0.5
TRIM27-207ENST00000498117 ACTN3Q08043 901 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-207ENST00000498117 PMPCAQ10713 525 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 PTK6Q13882 451 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 KCTD11Q693B1 232 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 Q71RC1 249 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-207ENST00000498117 CAMKMTQ7Z624 323 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 ANKRD37Q7Z713 158 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 RPS19BP1Q86WX3 136 aaKnown RBP11.91□□□□□ -0.5
TRIM27-207ENST00000498117 KLHDC8BQ8IXV7 354 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 ARHGEF39Q8N4T4 335 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 SKA2Q8WVK7 121 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-207ENST00000498117 TMEM125Q96AQ2 219 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 RMND5BQ96G75 393 aaPredicted RBP11.91□□□□□ -0.5
TRIM27-207ENST00000498117 MRFAP1L1Q96HT8 127 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 FOPNLQ96NB1 174 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 OR2A5Q96R48 311 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 LPAR4Q99677 370 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 ACAT2Q9BWD1 397 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 CDCP1Q9H5V8 836 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 LRRC40Q9H9A6 602 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 SPATA7Q9P0W8 599 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 PLEKHA6Q9Y2H5 1048 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 ALG6Q9Y672 507 aa11.91□□□□□ -0.5
TRIM27-207ENST00000498117 H0YIG0 161 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 KLRC4-KLRK1H3BQV0 150 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 NDC80O14777 642 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 CDC40O60508 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 RBP3P10745 1247 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 TFEBP19484 476 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 CTNNA2P26232 953 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 BDKRB1P46663 353 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 MEOX1P50221 254 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 UBASH3AP57075 661 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 EIF3EP60228 445 aaKnown RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 RELAQ04206 551 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 CCSMST1Q4G0I0 132 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 ARHGAP11AQ6P4F7 1023 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 DARS2Q6PI48 645 aaKnown RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 PAPD4Q6PIY7 484 aaKnown RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 AFTPHQ6ULP2 937 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 PAQR7Q86WK9 346 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 GOT1L1Q8NHS2 421 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 ACTL9Q8TC94 416 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 LKAAEAR1Q8TD35 194 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 MCOLN3Q8TDD5 553 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 NANOS1Q8WY41 292 aaKnown RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 MBD6Q96DN6 1003 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 C18orf12Q96KH6 178 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 MDFIQ99750 246 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 REPIN1Q9BWE0 567 aaKnown RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 CLEC4MQ9H2X3 399 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 TRIM45Q9H8W5 580 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 KLF13Q9Y2Y9 288 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 L3MBTL1Q9Y468 752 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 NFS1Q9Y697 457 aa11.9□□□□□ -0.5
TRIM27-207ENST00000498117 NSD1Q96L73 2696 aaPredicted RBP11.9□□□□□ -0.5
TRIM27-207ENST00000498117 A0A0U1RQJ8 604 aa11.89□□□□□ -0.51
TRIM27-207ENST00000498117 MACROD2A1Z1Q3 448 aa11.89□□□□□ -0.51
TRIM27-207ENST00000498117 KPNA5O15131 536 aa11.89□□□□□ -0.51
TRIM27-207ENST00000498117 ZNF189O75820 626 aaPredicted RBP11.89□□□□□ -0.51
TRIM27-207ENST00000498117 NSA2O95478 260 aaKnown RBP11.89□□□□□ -0.51
TRIM27-207ENST00000498117 GOT2P00505 430 aaKnown RBP11.89□□□□□ -0.51
TRIM27-207ENST00000498117 EZRP15311 586 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms