RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 GBP7Q8N8V2 638 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF485Q8NCK3 441 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 Q8NFD4 153 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 HEXDCQ8WVB3 486 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 SEPT1Q8WYJ6 367 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF486Q96H40 463 aaPredicted RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 SPATA33Q96N06 139 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 AGAP3Q96P47 875 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 LRRC3BQ96PB8 259 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 MAP3K3Q99759 626 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ASCL2Q99929 193 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 INPP5KQ9BT40 448 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 CDK19Q9BWU1 502 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 EDEM3Q9BZQ6 932 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 SHARPINQ9H0F6 387 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ATP13A3Q9H7F0 1226 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 Q9H8V8 135 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 RPF1Q9H9Y2 349 aaKnown RBP2.87□□□□□ -1.95
PSPC1-205ENST00000497722 NCKAP1Q9Y2A7 1128 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 ANGPTL3Q9Y5C1 460 aa2.87□□□□□ -1.95
PSPC1-205ENST00000497722 TRBV4-1A0A0J9YWV2 114 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 ANTXRLA6NF34 631 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 E5RGE8 158 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 H0YAE9 185 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 O00370 1275 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 PPIP5K2O43314 1243 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 ATP6AP2O75787 350 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 SLU7O95391 586 aaKnown RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 CLDN1O95832 211 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 TBX6O95947 436 aaPredicted RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 IGHEP01854 428 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 C9P02748 559 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 RLN1P04808 185 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 ELAVL4P26378 380 aaKnown RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 IRX1P78414 480 aaPredicted RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 CDH18Q13634 790 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 PTK6Q13882 451 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 TMEM132DQ14C87 1099 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 PTPN14Q15678 1187 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 FAM174BQ3ZCQ3 159 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 ZC2HC1BQ5TFG8 222 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 MACC1Q6ZN28 852 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 BTN2A1Q7KYR7 527 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 ABI3BPQ7Z7G0 1075 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 SIX6OS1Q8N1H7 587 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 SPEM1Q8N4L4 309 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF614Q8N883 585 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 OR1L3Q8NH93 324 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 DEPDC1BQ8WUY9 529 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 UBLCP1Q8WVY7 318 aaPredicted RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 LINC00479Q96M42 142 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 IWS1Q96ST2 819 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 OPRPNQ99935 248 aaPredicted RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 MCRIP2Q9BUT9 160 aaKnown RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 UPF3AQ9H1J1 476 aaKnown RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 ACTL8Q9H568 366 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 ZCCHC17Q9NP64 241 aaKnown RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 B3GAT2Q9NPZ5 323 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 MAN2C1Q9NTJ4 1040 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 ZDHHC18Q9NUE0 388 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 TEX10Q9NXF1 929 aaPredicted RBP2.86□□□□□ -1.95
PSPC1-205ENST00000497722 RASAL2Q9UJF2 1139 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 NSG2Q9Y328 171 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 PYGO1Q9Y3Y4 419 aa2.86□□□□□ -1.95
PSPC1-205ENST00000497722 A0A087WUV0 522 aaPredicted RBP2.85□□□□□ -1.95
PSPC1-205ENST00000497722 A0A1W2PPK0 400 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 KRTAP16-1A8MUX0 517 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 TMEM150CB9EJG8 249 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 FAM86B1E9PN63 330 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 F8VVB4 439 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 F8VWA3 439 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 CCDC188H7C350 402 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 SLC1A7O00341 560 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 TEX28O15482 410 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 CRCPO75575 148 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 FAM86B2P0C5J1 330 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 KRT5P13647 590 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 PRKACGP22612 351 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 AADACP22760 399 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 MFAP3P55082 362 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 XGP55808 180 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 DCDC1P59894 354 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 IL10RBQ08334 325 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 MTHFSDQ2M296 383 aaKnown RBP2.85□□□□□ -1.95
PSPC1-205ENST00000497722 XKR6Q5GH73 641 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 SUSD1Q6UWL2 747 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF497Q6ZNH5 498 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 SPATA19Q7Z5L4 167 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 ZER1Q7Z7L7 766 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 LRRTM1Q86UE6 522 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 RCOR2Q8IZ40 523 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 FAM89BQ8N5H3 189 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 OR5T2Q8NGG2 359 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 C9orf43Q8TAL5 461 aaPredicted RBP2.85□□□□□ -1.95
PSPC1-205ENST00000497722 ZNF519Q8TB69 540 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 APOBEC4Q8WW27 367 aaKnown RBP2.85□□□□□ -1.95
PSPC1-205ENST00000497722 PIK3R3Q92569 461 aa2.85□□□□□ -1.95
PSPC1-205ENST00000497722 ATP6V1E2Q96A05 226 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms