RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SLC39A8Q9C0K1 460 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 TRPV6Q9H1D0 765 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 METTL7AQ9H8H3 244 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 UPF2Q9HAU5 1272 aaKnown RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 FAM207AQ9NSI2 230 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 BARHL2Q9NY43 387 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 KLHL13Q9P2N7 655 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 TEKT2Q9UIF3 430 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 NOCTQ9UK39 431 aaKnown RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 TTC7AQ9ULT0 858 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 ZFR2Q9UPR6 939 aaKnown RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 MRPL11Q9Y3B7 192 aaKnown RBP5.78□□□□□ -1.48
BRCA1-224ENST00000497488 MYO5BQ9ULV0 1848 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 STRCP1A6NGW2 1772 aa5.78□□□□□ -1.48
BRCA1-224ENST00000497488 ABCC4O15439 1325 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 RIMS2Q9UQ26 1411 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 A0A0U1RQS6 177 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 MAGEB16A2A368 324 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 PRSS46E5RG02 174 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 GRID2O43424 1007 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 CTAG2O75638 210 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 GAS8O95995 478 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 IGHEP01854 428 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 ELFN1P0C7U0 828 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 C1QTNF9P0C862 333 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 ZCCHC18P0CG32 403 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 RALAP11233 206 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 JAK1P23458 1154 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 HOXA7P31268 230 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-224ENST00000497488 ADRA1AP35348 466 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 PTGER4P35408 488 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 CCT6AP40227 531 aaKnown RBP5.77□□□□□ -1.49
BRCA1-224ENST00000497488 SLC1A3P43003 542 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 HAND2P61296 217 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 CSNK2A1P68400 391 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-224ENST00000497488 ARHGAP19Q14CB8 494 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 NPTX1Q15818 432 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 FAM109BQ6ICB4 259 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-224ENST00000497488 GCSAMQ8N6F7 178 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 CSNK2A3Q8NEV1 391 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 ATP8B4Q8TF62 1192 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 U2AF1L4Q8WU68 220 aaKnown RBP5.77□□□□□ -1.49
BRCA1-224ENST00000497488 PROX1Q92786 737 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 GGHQ92820 318 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 PEX13Q92968 403 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 SLC41A3Q96GZ6 507 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 ZNF419Q96HQ0 510 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-224ENST00000497488 DHTKD1Q96HY7 919 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-224ENST00000497488 AIFM2Q9BRQ8 373 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 LMF2Q9BU23 707 aaKnown RBP5.77□□□□□ -1.49
BRCA1-224ENST00000497488 TM6SF1Q9BZW5 370 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 NPFFR1Q9GZQ6 430 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 IL17RBQ9NRM6 502 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 RCC2Q9P258 522 aaKnown RBP5.77□□□□□ -1.49
BRCA1-224ENST00000497488 SUN2Q9UH99 717 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 CHMP2BQ9UQN3 213 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 AP4B1Q9Y6B7 739 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 TRPM2O94759 1503 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 RAB3GAP2Q9H2M9 1393 aa5.77□□□□□ -1.49
BRCA1-224ENST00000497488 SETD5Q9C0A6 1442 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 PRSS51A0A1B0GVH4 220 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 TMEM89A2RUT3 159 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 ANKRD61A6NGH8 418 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 OGTO15294 1046 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 DCXO43602 365 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 LRP3O75074 770 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 ATP6AP2O75787 350 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 TTLL1O95922 423 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 S100A9P06702 114 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 FBLP22087 321 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 PAICSP22234 425 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 UGT1A1P22309 533 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 ZFP36P26651 326 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 STIP1P31948 543 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 FCGR2BP31994 310 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 CETN2P41208 172 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 CLDN15P56746 228 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 CCZ1BP86790 482 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 CCZ1P86791 482 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 FUT7Q11130 342 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 PDK3Q15120 406 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 DECR1Q16698 335 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 ENTPD8Q5MY95 495 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 FRG2Q64ET8 278 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 AMIGO1Q86WK6 493 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 RBFAQ8N0V3 343 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 LGI4Q8N135 537 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 SLC25A41Q8N5S1 370 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 HORMAD2Q8N7B1 307 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 OR52J3Q8NH60 311 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 SSMEM1Q8WWF3 244 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 DAZAP1Q96EP5 407 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 PLEKHG4BQ96PX9 1271 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 MRPL13Q9BYD1 178 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 CRNKL1Q9BZJ0 848 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 ZDHHC6Q9H6R6 413 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 RIOX1Q9H6W3 641 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 VCPKMTQ9H867 229 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 WDR76Q9H967 626 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 TRPC7Q9HCX4 862 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms