RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 BTBD10Q9BSF8 475 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 C1QTNF3Q9BXJ4 246 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ABCG8Q9H221 673 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 PIGMQ9H3S5 423 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 FN3KQ9H479 309 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SRD5A3Q9H8P0 318 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ECT2Q9H8V3 914 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 RNPEPL1Q9HAU8 725 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 MAGEF1Q9HAY2 307 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 MOV10Q9HCE1 1003 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 STARD5Q9NSY2 213 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ACSS1Q9NUB1 689 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 P4HTMQ9NXG6 502 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SEPT10Q9P0V9 454 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 RCC2Q9P258 522 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 HEY2Q9UBP5 337 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 OR14J1Q9UGF5 321 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 FBXL5Q9UKA1 691 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCPG1Q9ULG6 757 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 STX8Q9UNK0 236 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 FOXA2Q9Y261 457 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CLCA3PQ9Y6N3 262 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 CLSPNQ9HAW4 1339 aa2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 SONP18583 2426 aaKnown RBP2.36□□□□□ -2.03
CKS1BP2-201ENST00000497342 ANK2Q01484 3957 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 KIF26AQ9ULI4 1882 aaPredicted RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNFX1Q9P2E3 1918 aaKnown RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 TRBV5-3A0A0A0MS03 114 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC22A23A1A5C7 686 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 GRID2IPA4D2P6 1211 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 ANKUB1A6NFN9 424 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 DDTLA6NHG4 134 aaPredicted RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 UNC119BA6NIH7 251 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 LRRC3CA6NJW4 275 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 C2CD4BA6NLJ0 364 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 DUXAA6NLW8 204 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 FAM90A26D6RGX4 464 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 NPIPB6E9PJ23 425 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 RASGRF2O14827 1237 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 INPPL1O15357 1258 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 EIF3DO15371 548 aaKnown RBP eCLIP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 KCNAB3O43448 404 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 SSX4O60224 188 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 TSPAN1O60635 241 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 PRDM1O75626 825 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 RLN1P04808 185 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 HMOX1P09601 288 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPP1P10451 314 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 SAGP10523 405 aaPredicted RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 ST6GAL1P15907 406 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 ARF4P18085 180 aaPredicted RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 EPORP19235 508 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 TNFSF8P32971 234 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 WNT5AP41221 380 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 PRKCIP41743 596 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 CXCL12P48061 93 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 RGS7P49802 495 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 MAT1AQ00266 395 aaKnown RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 GAD2Q05329 585 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 PNRC1Q12796 327 aaPredicted RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 HNRNPDQ14103 355 aaKnown RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 PDK1Q15118 436 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 MLF2Q15773 248 aaPredicted RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCDC142Q17RM4 750 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 CEP55Q53EZ4 464 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCNYL2Q5T2Q4 361 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 TSTD2Q5T7W7 516 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 PAPD7Q5XG87 772 aaKnown RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 KCTD11Q693B1 232 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 SIGIRRQ6IA17 410 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 SHQ1Q6PI26 577 aaKnown RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 BRAT1Q6PJG6 821 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 Q6YL49 198 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 Q75L30 129 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 LIMS2Q7Z4I7 341 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPATA21Q7Z572 469 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 GRASPQ7Z6J2 395 aaPredicted RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZER1Q7Z7L7 766 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 PHLDB2Q86SQ0 1253 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 DZIP1Q86YF9 867 aaKnown RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 KLHDC8AQ8IYD2 350 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 SAMD14Q8IZD0 417 aaPredicted RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 BEST3Q8N1M1 668 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 LCORLQ8N3X6 602 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 MIGA1Q8NAN2 632 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 WDR20Q8TBZ3 569 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 URGCPQ8TCY9 931 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 GPT2Q8TD30 523 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 MAGEC3Q8TD91 643 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 HEXDCQ8WVB3 486 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 PIGKQ92643 395 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 HAS1Q92839 578 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 CASP10Q92851 521 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM18Q96B42 140 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 MOB3AQ96BX8 217 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZC3HAV1LQ96H79 300 aaKnown RBP2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 HES6Q96HZ4 224 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 EPSTI1Q96J88 318 aa2.35□□□□□ -2.03
CKS1BP2-201ENST00000497342 VPS39Q96JC1 886 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms