RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 MAGED4Q96JG8 741 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 C8orf76Q96K31 380 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 PANX2Q96RD6 677 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 USP28Q96RU2 1077 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 NAP1L4Q99733 375 aaKnown RBP3.63□□□□□ -1.83
TRIM4-205ENST00000496896 VGLL1Q99990 258 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 CABLES2Q9BTV7 478 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 KIFC3Q9BVG8 833 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 UTP14AQ9BVJ6 771 aaKnown RBP3.63□□□□□ -1.83
TRIM4-205ENST00000496896 FAM107BQ9H098 131 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 DPAGT1Q9H3H5 408 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 FGF21Q9NSA1 209 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 NRBP1Q9UHY1 535 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 MYH7P12883 1935 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 TJP1Q07157 1748 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 NUP188Q5SRE5 1749 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 RGPD2P0DJD1 1756 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 UBR2Q8IWV8 1755 aa3.63□□□□□ -1.83
TRIM4-205ENST00000496896 PAPPAQ13219 1627 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 HYKKA2RU49 373 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 JAK2O60674 1132 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 RPS6KA5O75582 802 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 SMC2O95347 1197 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 CTDNEP1O95476 244 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 PNMA6AP0CW24 399 aaPredicted RBP3.62□□□□□ -1.83
TRIM4-205ENST00000496896 IGHV4-31P0DP07 118 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 HSPD1P10809 573 aaKnown RBP3.62□□□□□ -1.83
TRIM4-205ENST00000496896 TOP1P11387 765 aaKnown RBP3.62□□□□□ -1.83
TRIM4-205ENST00000496896 SYKP43405 635 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 UBASH3AP57075 661 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 B3GALT5-AS1P59052 145 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 SP3Q02447 781 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 SPAG1Q07617 926 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 TFCP2Q12800 502 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 TRIM29Q14134 588 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 ALX1Q15699 326 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 C15orf59Q2T9L4 293 aaPredicted RBP3.62□□□□□ -1.83
TRIM4-205ENST00000496896 RILPL1Q5EBL4 403 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 RESP18Q5W5W9 173 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 FIGLAQ6QHK4 219 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 C4orf50Q6ZRC1 276 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 NUDT13Q86X67 352 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 COMMD2Q86X83 199 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 CEP57Q86XR8 500 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 RAB42Q8N4Z0 105 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 DCLK2Q8N568 766 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 IQUBQ8NA54 791 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 OR2AJ1Q8NGZ0 328 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 OR4C3Q8NH37 302 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 FAM222BQ8WU58 562 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 PHLDA1Q8WV24 401 aaPredicted RBP3.62□□□□□ -1.83
TRIM4-205ENST00000496896 CCDC107Q8WV48 283 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 SKA1Q96BD8 255 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 RPGRIP1Q96KN7 1286 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 AGAP3Q96P47 875 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 XPO4Q9C0E2 1151 aaKnown RBP3.62□□□□□ -1.83
TRIM4-205ENST00000496896 CPVLQ9H3G5 476 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 GOLPH3LQ9H4A5 285 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 OSER1Q9NX31 292 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 CWC25Q9NXE8 425 aaPredicted RBP3.62□□□□□ -1.83
TRIM4-205ENST00000496896 TAB2Q9NYJ8 693 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 ERAP1Q9NZ08 941 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 IFNKQ9P0W0 207 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 ZHX1Q9UKY1 873 aaPredicted RBP3.62□□□□□ -1.83
TRIM4-205ENST00000496896 PA2G4Q9UQ80 394 aaKnown RBP3.62□□□□□ -1.83
TRIM4-205ENST00000496896 USP16Q9Y5T5 823 aa3.62□□□□□ -1.83
TRIM4-205ENST00000496896 KDM6AO15550 1401 aaPredicted RBP3.61□□□□□ -1.83
TRIM4-205ENST00000496896 C4AP0C0L4 1744 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 C4BP0C0L5 1744 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 TIAM2Q8IVF5 1701 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 GLI3P10071 1580 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 A0A0U1RQG5 324 aaPredicted RBP3.61□□□□□ -1.83
TRIM4-205ENST00000496896 E9PQ18 207 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 XRCC3O43542 346 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 KIF5CO60282 957 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 AVILO75366 819 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 CCDC175P0C221 793 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 PCP11498 1178 aaKnown RBP3.61□□□□□ -1.83
TRIM4-205ENST00000496896 PFKFB1P16118 471 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 TRIM21P19474 475 aaKnown RBP3.61□□□□□ -1.83
TRIM4-205ENST00000496896 ZNF10P21506 573 aaPredicted RBP3.61□□□□□ -1.83
TRIM4-205ENST00000496896 HOXC13P31276 330 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 CASQ1P31415 396 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 PPP1R2P41236 205 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 NDUFA8P51970 172 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 NAP1L1P55209 391 aaKnown RBP3.61□□□□□ -1.83
TRIM4-205ENST00000496896 HNRNPDQ14103 355 aaKnown RBP3.61□□□□□ -1.83
TRIM4-205ENST00000496896 WHAMMP3Q1A5X7 153 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 FILIP1LQ4L180 1135 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 SPECC1LQ69YQ0 1117 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 ARMCX5Q6P1M9 558 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 FAM173BQ6P4H8 233 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 FIP1L1Q6UN15 594 aaKnown RBP3.61□□□□□ -1.83
TRIM4-205ENST00000496896 SYT10Q6XYQ8 523 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 COPS6Q7L5N1 327 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 FAM114A1Q8IWE2 563 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 NIPA2Q8N8Q9 360 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 MSANTD4Q8NCY6 345 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 OR5M8Q8NGP6 311 aa3.61□□□□□ -1.83
TRIM4-205ENST00000496896 EXD1Q8NHP7 514 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms