RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.32
GPC1-209ENST00000495100 GPR150Q8NGU9 434 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 PHF10Q8WUB8 498 aaKnown RBP13.02□□□□□ -0.32
GPC1-209ENST00000495100 APOL4Q9BPW4 351 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 COPS4Q9BT78 406 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 SLC2A11Q9BYW1 496 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 RAD18Q9NS91 495 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 PSME2Q9UL46 239 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 KCNE2Q9Y6J6 123 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 H3BNC9 293 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 RGS10O43665 173 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 PCDH7O60245 1069 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 ATP1B2P14415 290 aaPredicted RBP13.02□□□□□ -0.32
GPC1-209ENST00000495100 VIPR2P41587 438 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 TAS2R50P59544 299 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 NKX3-2P78367 333 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 RFX4Q33E94 735 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 LEXMQ3ZCV2 418 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 RPS26P11Q5JNZ5 115 aaPredicted RBP13.02□□□□□ -0.32
GPC1-209ENST00000495100 TYW3Q6IPR3 259 aaKnown RBP13.02□□□□□ -0.32
GPC1-209ENST00000495100 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 CHDHQ8NE62 594 aaPredicted RBP13.02□□□□□ -0.32
GPC1-209ENST00000495100 FNDC8Q8TC99 324 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 ACDQ96AP0 544 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 XKR8Q9H6D3 395 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 IMP3Q9NV31 184 aaKnown RBP13.02□□□□□ -0.32
GPC1-209ENST00000495100 C14orf119Q9NWQ9 140 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 ADPRHL2Q9NX46 363 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 ZDHHC3Q9NYG2 299 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 GPR83Q9NYM4 423 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 ABCD2Q9UBJ2 740 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 PPT2Q9UMR5 302 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 PHF24Q9UPV7 400 aa13.02□□□□□ -0.32
GPC1-209ENST00000495100 FEZF1A0PJY2 475 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 KLHL33A6NCF5 533 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 TGM5O43548 720 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 S100A5P33763 92 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 TPTEP56180 551 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 CBX3Q13185 183 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 GRASPQ7Z6J2 395 aaPredicted RBP13.02□□□□□ -0.33
GPC1-209ENST00000495100 ZNF605Q86T29 641 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 RNF130Q86XS8 419 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 DCP2Q8IU60 420 aaKnown RBP13.02□□□□□ -0.33
GPC1-209ENST00000495100 ABHD11Q8NFV4 315 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 FEVQ99581 238 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 DYRK1BQ9Y463 629 aa13.02□□□□□ -0.33
GPC1-209ENST00000495100 ZNF99A8MXY4 864 aaPredicted RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 ABCB7O75027 752 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 TULP3O75386 442 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 STSP08842 583 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 CR2P20023 1033 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 PCYT1AP49585 367 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 HLCSP50747 726 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 RPP38P78345 283 aaKnown RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 C11orf91Q3C1V1 193 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 TPRG1Q6ZUI0 275 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 WDR53Q7Z5U6 358 aaPredicted RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 GATAD2AQ86YP4 633 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 DCAF4L2Q8NA75 395 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 TRMT61BQ9BVS5 477 aaKnown RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 ZBTB20Q9HC78 741 aaPredicted RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 PLXNB2O15031 1838 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 PLXNA1Q9UIW2 1896 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 PRSS23O95084 383 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 MFN2O95140 757 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 BMP10O95393 424 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 CRHBPP24387 322 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 ATP4BP51164 291 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 CREMQ03060 361 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 EMX1Q04741 257 aaPredicted RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 SPRED2Q7Z698 418 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 MMAAQ8IVH4 418 aaKnown RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 SLC34A3Q8N130 599 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 ZNF548Q8NEK5 533 aaPredicted RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 COX4I2Q96KJ9 171 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 Q96MT0 163 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 KLF16Q9BXK1 252 aaPredicted RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 PRRG3Q9BZD7 231 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 CD320Q9NPF0 282 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 USE1Q9NZ43 259 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 CH25HO95992 272 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 PABPC1P11940 636 aaKnown RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 SYN1P17600 705 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 MAPK1P28482 360 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 KDELR2P33947 212 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 PTSQ03393 145 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 MPPE1Q53F39 396 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 CAMKK1Q8N5S9 505 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 OR5K1Q8NHB7 308 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 CAPSLQ8WWF8 208 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 CLP1Q92989 425 aaKnown RBP13.01□□□□□ -0.33
GPC1-209ENST00000495100 DMRTB1Q96MA1 342 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 OARD1Q9Y530 152 aa13.01□□□□□ -0.33
GPC1-209ENST00000495100 TCRBV5S2A0A599 114 aa13□□□□□ -0.33
GPC1-209ENST00000495100 SCELO95171 688 aa13□□□□□ -0.33
GPC1-209ENST00000495100 EIF4EBP2Q13542 120 aaPredicted RBP13□□□□□ -0.33
GPC1-209ENST00000495100 TRIM71Q2Q1W2 868 aaKnown RBP13□□□□□ -0.33
GPC1-209ENST00000495100 XKR7Q5GH72 579 aa13□□□□□ -0.33
GPC1-209ENST00000495100 CLEC12AQ5QGZ9 265 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms