RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 PDE7AQ13946 482 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 CCNIQ14094 377 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 TRIM25Q14258 630 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 SLBPQ14493 270 aaKnown RBP eCLIP6.53□□□□□ -1.36
MSH5-217ENST00000494458 KPNB1Q14974 876 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 RPS6KA2Q15349 733 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 ZIC1Q15915 447 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 DPY19L1Q2PZI1 675 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 KIF19Q2TAC6 998 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 DEPDC1Q5TB30 811 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 CACHD1Q5VU97 1274 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 ICE2Q659A1 982 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 ANO7Q6IWH7 933 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 PRMT9Q6P2P2 845 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 TMIGD1Q6UXZ0 262 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 C17orf64Q86WR6 236 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 PTRH1Q86Y79 214 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 HPS6Q86YV9 775 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 HID1Q8IV36 788 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 KIAA2013Q8IYS2 634 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 ADGRF3Q8IZF5 1079 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 SIX5Q8N196 739 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 SDR16C5Q8N3Y7 309 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 FRMD1Q8N878 549 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 ANKRD53Q8N9V6 530 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 GOLM1Q8NBJ4 401 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 OR52E1Q8NGJ3 308 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 CCL4L1Q8NHW4 92 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 CREB3L4Q8TEY5 395 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 GTF2H4Q92759 462 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 TSACCQ96A04 125 aaPredicted RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 TMEM125Q96AQ2 219 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 LRRC58Q96CX6 371 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 COQ8BQ96D53 544 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 MED8Q96G25 268 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 ZNF764Q96H86 408 aaPredicted RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 IL17FQ96PD4 163 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 FERD3LQ96RJ6 166 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 HBEGFQ99075 208 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 NRTNQ99748 197 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 C1orf50Q9BV19 199 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 GPR174Q9BXC1 333 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 DUSP15Q9H1R2 295 aaPredicted RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 SPNS1Q9H2V7 528 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 TBC1D17Q9HA65 648 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 SPAG4Q9NPE6 437 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 DMRT3Q9NQL9 472 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 TMEM184CQ9NVA4 438 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 GID8Q9NWU2 228 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 NMRK1Q9NWW6 199 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 STX18Q9P2W9 335 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 SUCOQ9UBS9 1254 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 FAM8A1Q9UBU6 413 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 CROTQ9UKG9 612 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 PSMD13Q9UNM6 376 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 EXO1Q9UQ84 846 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 RUVBL1Q9Y265 456 aaKnown RBP6.53□□□□□ -1.36
MSH5-217ENST00000494458 DYRK1BQ9Y463 629 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 GPSM3Q9Y4H4 160 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 PCDHB11Q9Y5F2 797 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 SLCO1B1Q9Y6L6 691 aa6.53□□□□□ -1.36
MSH5-217ENST00000494458 KIR2DS5A0A0G2JLQ3 304 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 A0A0G2JNG1 304 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 CCDC154A6NI56 674 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 OR52A4PA6NMU1 304 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 KIR2DS3K7RE56 304 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 NME4O00746 187 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 KDM1AO60341 852 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 DNAJA2O60884 412 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 FKBP6O75344 327 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 ERN1O75460 977 aaKnown RBP6.52□□□□□ -1.37
MSH5-217ENST00000494458 CLEC3AO75596 197 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 SORBS2O94875 1100 aaKnown RBP6.52□□□□□ -1.37
MSH5-217ENST00000494458 RASGRP1O95267 797 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 CSF2P04141 144 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 PGRP06401 933 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 THEGLP0DJG4 465 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 CDH1P12830 882 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 NME1P15531 152 aaKnown RBP6.52□□□□□ -1.37
MSH5-217ENST00000494458 PRPS1L1P21108 318 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 ME2P23368 584 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 AK4P27144 223 aaPredicted RBP6.52□□□□□ -1.37
MSH5-217ENST00000494458 SHMT2P34897 504 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 CXCL12P48061 93 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 GZMMP51124 257 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 BLKP51451 505 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 CCR8P51685 355 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 EEFSECP57772 596 aaKnown RBP6.52□□□□□ -1.37
MSH5-217ENST00000494458 KCNK10P57789 538 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 SRSF11Q05519 484 aaKnown RBP6.52□□□□□ -1.37
MSH5-217ENST00000494458 HYAL2Q12891 473 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 PWP1Q13610 501 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 PTGR1Q14914 329 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 KIR2DS3Q14952 304 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 KIR2DS5Q14953 304 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 UBXN2BQ14CS0 331 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 HIST2H2ACQ16777 129 aaPredicted RBP6.52□□□□□ -1.37
MSH5-217ENST00000494458 IMPG1Q17R60 797 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 SPIN4Q56A73 249 aa6.52□□□□□ -1.37
MSH5-217ENST00000494458 SAMD4BQ5PRF9 694 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms