RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 OSER1Q9NX31 292 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 TMEM161AQ9NX61 479 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 SPG21Q9NZD8 308 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 TBC1D7Q9P0N9 293 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 MAN1B1Q9UKM7 699 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 FBXW2Q9UKT8 454 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 STX8Q9UNK0 236 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 CHKBQ9Y259 395 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 PADI2Q9Y2J8 665 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 GREB1LQ9C091 1923 aaPredicted RBP2.17□□□□□ -2.06
LMNB1-207ENST00000494185 ACEP12821 1306 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 STK36Q9NRP7 1315 aa2.17□□□□□ -2.06
LMNB1-207ENST00000494185 IGHV4-61A0A0C4DH41 118 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 TRBV2A0A0J9YWF9 115 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 DUXAA6NLW8 204 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 KBTBD13C9JR72 458 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 PLOD2O00469 737 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 EPHB6O15197 1021 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 ST8SIA3O43173 380 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 TXNL1O43396 289 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 FCGR3BO75015 233 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 STAM2O75886 525 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 LETM1O95202 739 aaPredicted RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 PLGP00747 810 aaPredicted RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 IGHV2-70P01814 119 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 IGHV4-59P01825 116 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 SLC4A1P02730 911 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 ALPPP05187 535 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 PRKAR1AP10644 381 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 ALPPL2P10696 532 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 EPORP19235 508 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 EFNA1P20827 205 aaPredicted RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 CTNNB1P35222 781 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 TIMP3P35625 211 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 HSD17B3P37058 310 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 MAGEA11P43364 429 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 RPL21P46778 160 aaKnown RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 NR0B1P51843 470 aaKnown RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 CASP9P55211 416 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 TPD52P55327 224 aaPredicted RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 CLDN15P56746 228 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 UBASH3AP57075 661 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 LINC01547P58512 204 aaPredicted RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 KRTAP10-9P60411 292 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 HTD2P86397 168 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 MAT1AQ00266 395 aaKnown RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 CDR2Q01850 454 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 KLC1Q07866 573 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 ARHGAP1Q07960 439 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 GAMTQ14353 236 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 NPTX1Q15818 432 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 SGCBQ16585 318 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 ODF4Q2M2E3 257 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 LRRC73Q5JTD7 316 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 C20orf194Q5TEA3 1177 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 BSPRYQ5W0U4 402 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 C11orf63Q6NUN7 778 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 MFSD12Q6NUT3 480 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 NEK5Q6P3R8 708 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 CORO6Q6QEF8 472 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 METTL7BQ6UX53 244 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 ADCK1Q86TW2 530 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 NLRP14Q86W24 1093 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 NUDT13Q86X67 352 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 FAM219AQ8IW50 185 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 CDK20Q8IZL9 346 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 SFRP1Q8N474 314 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 DNAJC22Q8N4W6 341 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 BMPERQ8N8U9 685 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 OR5M8Q8NGP6 311 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 OR1J1Q8NGS3 322 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 NCOA7Q8NI08 942 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 RNF128Q8TEB7 428 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 MAGED4Q96JG8 741 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 PGLYRP2Q96PD5 576 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 KLHL5Q96PQ7 755 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 RUFY1Q96T51 708 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 OPRPNQ99935 248 aaPredicted RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 RTP3Q9BQQ7 232 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 ATG101Q9BSB4 218 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 GTPBP2Q9BX10 602 aaKnown RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 VN1R1Q9GZP7 353 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 WDR13Q9H1Z4 485 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 HSD3B7Q9H2F3 369 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 SRD5A3Q9H8P0 318 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 AKIRIN1Q9H9L7 192 aaPredicted RBP2.16□□□□□ -2.06
LMNB1-207ENST00000494185 CDH20Q9HBT6 801 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 CHST11Q9NPF2 352 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 FGF21Q9NSA1 209 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 DNAJC11Q9NVH1 559 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 TAS2R3Q9NYW6 316 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 NINJ2Q9NZG7 142 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 ACTR3BQ9P1U1 418 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 MAD2L2Q9UI95 211 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 BLOC1S6Q9UL45 172 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 MTUS1Q9ULD2 1270 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 NOTCH4Q99466 2003 aa2.16□□□□□ -2.06
LMNB1-207ENST00000494185 IGHV4-4A0A075B6R2 117 aa2.15□□□□□ -2.07
LMNB1-207ENST00000494185 IGKV3D-15A0A087WSY6 115 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms