RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PKP2Q99959 881 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 EBPLQ9BY08 206 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 PITHD1Q9GZP4 211 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-216ENST00000492977 MVB12BQ9H7P6 319 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 UBE2ZQ9H832 354 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-216ENST00000492977 DMRT3Q9NQL9 472 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 SLC2A4RGQ9NR83 387 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 CCM2LQ9NUG4 571 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-216ENST00000492977 MOSPD1Q9UJG1 213 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 KCNK6Q9Y257 313 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 WDR37Q9Y2I8 494 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 GPSM3Q9Y4H4 160 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 NEUROG3Q9Y4Z2 214 aa13.53□□□□□ -0.24
PTPN7-216ENST00000492977 MYO10Q9HD67 2058 aa13.52□□□□□ -0.24
PTPN7-216ENST00000492977 TRBV5-3A0A0A0MS03 114 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 TCRBV21S2A2A0A5A6 115 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 PRSS38A1L453 326 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 NARSO43776 548 aaKnown RBP13.52□□□□□ -0.25
PTPN7-216ENST00000492977 APBB3O95704 486 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 ASGR2P07307 311 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 ANXA4P09525 319 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-216ENST00000492977 UMPSP11172 480 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 CDH1P12830 882 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 GABRG2P18507 467 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 ACSL1P33121 698 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 KIR3DL1P43629 444 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 MTPNP58546 118 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 RAE1P78406 368 aaKnown RBP13.52□□□□□ -0.25
PTPN7-216ENST00000492977 PLIN5Q00G26 463 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 CYP4F3Q08477 520 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 LRRC36Q1X8D7 754 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 UAP1L1Q3KQV9 507 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 ADNP2Q6IQ32 1131 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 TMIGD1Q6UXZ0 262 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 TMEM132CQ8N3T6 1108 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 TMEM102Q8N9M5 508 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-216ENST00000492977 ABHD11Q8NFV4 315 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 TNIP2Q8NFZ5 429 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 OR8J2Q8NGG1 315 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 SH3KBP1Q96B97 665 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 CAMK1GQ96NX5 476 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 RAB11FIP5Q9BXF6 653 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 PAIP1Q9H074 479 aaKnown RBP13.52□□□□□ -0.25
PTPN7-216ENST00000492977 PRM3Q9NNZ6 103 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 WASH6PQ9NQA3 447 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 SERHLQ9NQF3 203 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-216ENST00000492977 MAGEL2Q9UJ55 1249 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 LHX6Q9UPM6 363 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.25
PTPN7-216ENST00000492977 A0A1W2PPC1 479 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 DHRS12A0PJE2 317 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 POM121BA6NF01 834 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 HNRNPRO43390 633 aaKnown RBP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 LRATO95237 230 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 GPIP06744 558 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 SRFP11831 508 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 IL10P22301 178 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 HNRNPA2B1P22626 353 aaKnown RBP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 PSMA4P25789 261 aaKnown RBP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 PTX3P26022 381 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 TIA1P31483 386 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 TRPC1P48995 793 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 SELPLGQ14242 412 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 NFATC4Q14934 902 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 MLF2Q15773 248 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 UGT8Q16880 541 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 GRAMD1BQ3KR37 738 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 MSRB3Q8IXL7 192 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 C2orf73Q8N5S3 287 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 CANT1Q8WVQ1 401 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 ZNF583Q96ND8 569 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 OR2M4Q96R27 311 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 PRPF18Q99633 342 aaKnown RBP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 MYOCQ99972 504 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 AIF1LQ9BQI0 150 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 THUMPD3Q9BV44 507 aaKnown RBP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 NT5DC2Q9H857 520 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 FGF22Q9HCT0 170 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 FAM120CQ9NX05 1096 aaKnown RBP13.51□□□□□ -0.25
PTPN7-216ENST00000492977 SLC25A37Q9NYZ2 338 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 TAC3Q9UHF0 121 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 DTNAQ9Y4J8 743 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 PCDHB14Q9Y5E9 798 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 HEBP2Q9Y5Z4 205 aa13.51□□□□□ -0.25
PTPN7-216ENST00000492977 A0A1W2PPV9 198 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 TOR1BO14657 336 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 TNFRSF10CO14798 259 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 LATO43561 262 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 AKAP10O43572 662 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 KDM1AO60341 852 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 COX7A2P14406 83 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 HTR1BP28222 390 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 SERPINB1P30740 379 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 RAB28P51157 221 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 CCR8P51685 355 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 CLDN2P57739 230 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 OR4D2P58180 307 aa13.5□□□□□ -0.25
PTPN7-216ENST00000492977 MAP7Q14244 749 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms