RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 A1L4Q6 167 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 ANKUB1A6NFN9 424 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 TXNDC9O14530 226 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 DNALI1O14645 258 aaPredicted RBP16.39■□□□□ 0.21
SGMS1-204ENST00000492601 PRPF4O43172 522 aaKnown RBP eCLIP16.39■□□□□ 0.21
SGMS1-204ENST00000492601 ZSCAN12O43309 604 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 FOXS1O43638 330 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 KLHL18O94889 574 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 HEXBP07686 556 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 COX6A1P12074 109 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 SLC26A3P40879 764 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 TBPL1P62380 186 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 SNRPNP63162 240 aaKnown RBP16.39■□□□□ 0.21
SGMS1-204ENST00000492601 ELOAQ14241 798 aaKnown RBP16.39■□□□□ 0.21
SGMS1-204ENST00000492601 C4orf17Q53FE4 359 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 RBM20Q5T481 1227 aaKnown RBP16.39■□□□□ 0.21
SGMS1-204ENST00000492601 GARNL3Q5VVW2 1013 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 ISLR2Q6UXK2 745 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 NDUFAF7Q7L592 441 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 ARHGEF39Q8N4T4 335 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 MCOLN3Q8TDD5 553 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 ALKBH8Q96BT7 664 aaKnown RBP16.39■□□□□ 0.21
SGMS1-204ENST00000492601 EBNA1BP2Q99848 306 aaKnown RBP16.39■□□□□ 0.21
SGMS1-204ENST00000492601 EPS8L2Q9H6S3 715 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 CCDC177Q9NQR7 707 aaPredicted RBP16.39■□□□□ 0.21
SGMS1-204ENST00000492601 SLC17A6Q9P2U8 582 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 SH2B3Q9UQQ2 575 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 MYO7BQ6PIF6 2116 aa16.39■□□□□ 0.21
SGMS1-204ENST00000492601 EIF3FO00303 357 aaPredicted RBP16.38■□□□□ 0.21
SGMS1-204ENST00000492601 CXCR2P25025 360 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 GABRB3P28472 473 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 CDKN2DP55273 166 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 MAT1AQ00266 395 aaKnown RBP16.38■□□□□ 0.21
SGMS1-204ENST00000492601 RELAQ04206 551 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 CDC16Q13042 620 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 ZNF169Q14929 603 aaPredicted RBP16.38■□□□□ 0.21
SGMS1-204ENST00000492601 BBS9Q3SYG4 887 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 HP1BP3Q5SSJ5 553 aaPredicted RBP16.38■□□□□ 0.21
SGMS1-204ENST00000492601 CRYBG3Q68DQ2 2970 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 UGT3A1Q6NUS8 523 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 PAQR3Q6TCH7 311 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 IGDCC3Q8IVU1 814 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 KBTBD2Q8IY47 623 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 AMER2Q8N7J2 671 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 OR9A4Q8NGU2 314 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 MACROD1Q9BQ69 325 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 ATG10Q9H0Y0 220 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 MKKSQ9NPJ1 570 aaPredicted RBP16.38■□□□□ 0.21
SGMS1-204ENST00000492601 TMEM184CQ9NVA4 438 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 C14orf105Q9NVL8 296 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 TAS2R13Q9NYV9 303 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 ERRFI1Q9UJM3 462 aaPredicted RBP16.38■□□□□ 0.21
SGMS1-204ENST00000492601 PDE10AQ9Y233 779 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 ITPR2Q14571 2701 aa16.38■□□□□ 0.21
SGMS1-204ENST00000492601 AHSGP02765 367 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 C8GP07360 202 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 CELA2AP08217 269 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 PRR35P0CG20 571 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 RGS4P49798 205 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 PGGT1BP53609 377 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 MFAP5Q13361 173 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 NDUFA9Q16795 377 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 SPANXN3Q5MJ09 141 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 LRRC8EQ6NSJ5 796 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 VN1R4Q7Z5H5 301 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 ZC3H7AQ8IWR0 971 aaKnown RBP16.37■□□□□ 0.21
SGMS1-204ENST00000492601 PALM2Q8IXS6 379 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 SIRT6Q8N6T7 355 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 CATSPER1Q8NEC5 780 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 BRIX1Q8TDN6 353 aaKnown RBP16.37■□□□□ 0.21
SGMS1-204ENST00000492601 LINGO1Q96FE5 620 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 CCDC138Q96M89 665 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 BARD1Q99728 777 aaKnown RBP16.37■□□□□ 0.21
SGMS1-204ENST00000492601 KCNF1Q9H3M0 494 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 PARVBQ9HBI1 364 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 PPANQ9NQ55 473 aaKnown RBP16.37■□□□□ 0.21
SGMS1-204ENST00000492601 AGPAT4Q9NRZ5 378 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 PTGFRNQ9P2B2 879 aa16.37■□□□□ 0.21
SGMS1-204ENST00000492601 IGHV1-45A0A0A0MS14 117 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 FEZF1A0PJY2 475 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 CES2O00748 559 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 JRKO75564 520 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 TTC4O95801 387 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 UQCRHP07919 91 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 TSFMP43897 325 aaKnown RBP16.36■□□□□ 0.21
SGMS1-204ENST00000492601 AVPR1BP47901 424 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 EFNA3P52797 238 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 RPS15AP62244 130 aaKnown RBP16.36■□□□□ 0.21
SGMS1-204ENST00000492601 NAE1Q13564 534 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 FAM53BQ14153 422 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 TLR1Q15399 786 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 PHKG1Q16816 387 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 AGTRAPQ6RW13 159 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 PRSS41Q7RTY9 318 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 PCGF5Q86SE9 256 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 SHISA5Q8N114 240 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 MYO1HQ8N1T3 1032 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 GABPB2Q8TAK5 448 aaPredicted RBP16.36■□□□□ 0.21
SGMS1-204ENST00000492601 GRHL3Q8TE85 626 aa16.36■□□□□ 0.21
SGMS1-204ENST00000492601 PSMF1Q92530 271 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms