RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LINC00523Q86TU6 105 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 ZNF227Q86WZ6 799 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 PLD3Q8IV08 490 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 LRRC57Q8N9N7 239 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 DNAAF3Q8N9W5 541 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 OR9A4Q8NGU2 314 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 PHF10Q8WUB8 498 aaKnown RBP12.48□□□□□ -0.41
USF1-206ENST00000491629 CHTF18Q8WVB6 975 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 BIRC8Q96P09 236 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 TSSK1BQ9BXA7 367 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 DRC3Q9H069 523 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 ETNK1Q9HBU6 452 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 GPAMQ9HCL2 828 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 MRPS30Q9NP92 439 aaKnown RBP12.48□□□□□ -0.41
USF1-206ENST00000491629 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
USF1-206ENST00000491629 CHRAC1Q9NRG0 131 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 CATSPERZQ9NTU4 200 aa12.48□□□□□ -0.41
USF1-206ENST00000491629 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
USF1-206ENST00000491629 F8W8V4 182 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 HAT1O14929 419 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 CD3EAPO15446 510 aaKnown RBP12.47□□□□□ -0.41
USF1-206ENST00000491629 PRPF4O43172 522 aaKnown RBP eCLIP12.47□□□□□ -0.41
USF1-206ENST00000491629 ANXA5P08758 320 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 RPS3P23396 243 aaKnown RBP eCLIP12.47□□□□□ -0.41
USF1-206ENST00000491629 CCNFP41002 786 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 PRDX1Q06830 199 aaKnown RBP12.47□□□□□ -0.41
USF1-206ENST00000491629 TFF3Q07654 80 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 FAM53BQ14153 422 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 LONRF1Q17RB8 773 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 ICE2Q659A1 982 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 GALNTL5Q7Z4T8 443 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 VN1R4Q7Z5H5 301 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.47□□□□□ -0.41
USF1-206ENST00000491629 ANKRD37Q7Z713 158 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 CNGA4Q8IV77 575 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 PPFIBP2Q8ND30 876 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 OR9A1PQ8NGU1 263 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
USF1-206ENST00000491629 NRGNQ92686 78 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 SDCCAG3Q96C92 435 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 ZNF354BQ96LW1 612 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 CCDC138Q96M89 665 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 TTC1Q99614 292 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 TMUB1Q9BVT8 246 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 TNFRSF10DQ9UBN6 386 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 TAC3Q9UHF0 121 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 TEKT2Q9UIF3 430 aa12.47□□□□□ -0.41
USF1-206ENST00000491629 NSD1Q96L73 2696 aaPredicted RBP12.47□□□□□ -0.41
USF1-206ENST00000491629 GRID2IPA4D2P6 1211 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 E9PLN8 166 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 MYO1CO00159 1063 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 CBFA2T2O43439 604 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 NIPSNAP2O75323 286 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 TPM1P09493 284 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 MYBL2P10244 700 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 ETS1P14921 441 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 ARNTP27540 789 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 EEF1DP29692 281 aaKnown RBP12.46□□□□□ -0.41
USF1-206ENST00000491629 NR0B1P51843 470 aaKnown RBP12.46□□□□□ -0.41
USF1-206ENST00000491629 ART1P52961 327 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 AP2B1P63010 937 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 PRAMEP78395 509 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 CRADDP78560 199 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 PTRHD1Q6GMV3 140 aaKnown RBP12.46□□□□□ -0.41
USF1-206ENST00000491629 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 LRRC56Q8IYG6 542 aaPredicted RBP12.46□□□□□ -0.41
USF1-206ENST00000491629 CPSF7Q8N684 471 aaKnown RBP12.46□□□□□ -0.41
USF1-206ENST00000491629 ATG4AQ8WYN0 398 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 SMPDL3AQ92484 453 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 FAM136AQ96C01 138 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 PKP4Q99569 1192 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 MACROD1Q9BQ69 325 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 VKORC1Q9BQB6 163 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 UTP23Q9BRU9 249 aaKnown RBP12.46□□□□□ -0.41
USF1-206ENST00000491629 LACRTQ9GZZ8 138 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 KCNK13Q9HB14 408 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 RRAGDQ9NQL2 400 aaPredicted RBP12.46□□□□□ -0.41
USF1-206ENST00000491629 TREX1Q9NSU2 369 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 PCYOX1Q9UHG3 505 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 GNPTGQ9UJJ9 305 aa12.46□□□□□ -0.41
USF1-206ENST00000491629 PACSIN2Q9UNF0 486 aaPredicted RBP12.46□□□□□ -0.41
USF1-206ENST00000491629 REXO2Q9Y3B8 237 aaKnown RBP12.46□□□□□ -0.41
USF1-206ENST00000491629 SOWAHDA6NJG2 315 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 ERI2A8K979 691 aaKnown RBP12.45□□□□□ -0.42
USF1-206ENST00000491629 GABRR3A8MPY1 467 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 E7ENX8 843 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 PHF2O75151 1096 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 VPS26AO75436 327 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 PSIP1O75475 530 aaKnown RBP12.45□□□□□ -0.42
USF1-206ENST00000491629 SP1P08047 785 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 EZRP15311 586 aaKnown RBP12.45□□□□□ -0.42
USF1-206ENST00000491629 CD1EP15812 388 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 ABOP16442 354 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 PTGER1P34995 402 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 RPA3P35244 121 aaPredicted RBP12.45□□□□□ -0.42
USF1-206ENST00000491629 TTPAP49638 278 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 EIF3BP55884 814 aaKnown RBP12.45□□□□□ -0.42
USF1-206ENST00000491629 TAP2Q03519 686 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 RELAQ04206 551 aa12.45□□□□□ -0.42
USF1-206ENST00000491629 KCNJ11Q14654 390 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms