RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 PRAMEF4O60810 478 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 VPS4BO75351 444 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 ULK1O75385 1050 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 RASSF9O75901 435 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 MAGP20916 626 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 CSF2RBP32927 897 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 AHRP35869 848 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 PIK3CBP42338 1070 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 SCTRP47872 440 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 GFERP55789 205 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 ZRSR2Q15696 482 aaKnown RBP12.71□□□□□ -0.37
SNX12-205ENST00000490561 CPSF6Q16630 551 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNX12-205ENST00000490561 TMTC4Q5T4D3 741 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 PRAMEF9Q5VWM5 478 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 CYB5D1Q6P9G0 228 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 FAM92BQ6ZTR7 304 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 USP53Q70EK8 1073 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 RNF44Q7L0R7 432 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 CPLX4Q7Z7G2 160 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 TRIM73Q86UV7 250 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 ZNF655Q8N720 491 aaPredicted RBP12.71□□□□□ -0.37
SNX12-205ENST00000490561 GBP7Q8N8V2 638 aaPredicted RBP12.71□□□□□ -0.37
SNX12-205ENST00000490561 TRPV3Q8NET8 790 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 TWIST2Q8WVJ9 160 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 MAP3K3Q99759 626 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 ZFYVE21Q9BQ24 234 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 RHBGQ9H310 441 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 SYNDIG1Q9H7V2 258 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 ZNF395Q9H8N7 513 aaPredicted RBP12.71□□□□□ -0.37
SNX12-205ENST00000490561 PDE7BQ9NP56 450 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 FGFR1OP2Q9NVK5 253 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 PNPOQ9NVS9 261 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 NMRK1Q9NWW6 199 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 BTRCQ9Y297 605 aa12.71□□□□□ -0.37
SNX12-205ENST00000490561 ARID1BQ8NFD5 2236 aaPredicted RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 ANKDD1BA6NHY2 528 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 SLC9B1P1A6NJY1 282 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 D6RAR5 112 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 SLC28A1O00337 649 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 FOXE1O00358 373 aaPredicted RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 TXNDC9O14530 226 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 OR1F1O43749 312 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 PCNAP12004 261 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 ST6GAL1P15907 406 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 ALOX15P16050 662 aaPredicted RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 CD22P20273 847 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 SDHBP21912 280 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 MLLT3P42568 568 aaPredicted RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 LSSP48449 732 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 INHBCP55103 352 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 PPP1CAP62136 330 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 HSD11B2P80365 405 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 CSTF3Q12996 717 aaKnown RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 RBBP5Q15291 538 aaKnown RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 TRIP6Q15654 476 aaKnown RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 FCRL6Q6DN72 434 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 CLEC6AQ6EIG7 209 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 RBM44Q6ZP01 1051 aaKnown RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 DCBLD1Q8N8Z6 715 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 MFSD9Q8NBP5 474 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 OR7G3Q8NG95 312 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 WDR20Q8TBZ3 569 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 AGR3Q8TD06 166 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 SELENOMQ8WWX9 145 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 KLHL6Q8WZ60 621 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 USP7Q93009 1102 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 TMEM74Q96NL1 305 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 PHOX2BQ99453 314 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 NUDT22Q9BRQ3 303 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 NLNQ9BYT8 704 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 ZNF768Q9H5H4 540 aaKnown RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 BRF2Q9HAW0 419 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 PRM3Q9NNZ6 103 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 RIC8BQ9NVN3 520 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 SOHLH2Q9NX45 425 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 ZFP69BQ9UJL9 534 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 APOBEC2Q9Y235 224 aaKnown RBP12.7□□□□□ -0.38
SNX12-205ENST00000490561 FIS1Q9Y3D6 152 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 USH1CQ9Y6N9 552 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 USP34Q70CQ2 3546 aa12.7□□□□□ -0.38
SNX12-205ENST00000490561 A0A1B0GTL3 188 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 FFAR3O14843 346 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 HAT1O14929 419 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 GPR42O15529 346 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 RGS14O43566 566 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 SRPX2O60687 465 aaPredicted RBP12.69□□□□□ -0.38
SNX12-205ENST00000490561 CLEC3AO75596 197 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 MSL3P1P0C860 447 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 KITP10721 976 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 THRAP10827 490 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 FOXA1P55317 472 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 CFHR1Q03591 330 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 RGS1Q08116 209 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 UGT3A2Q3SY77 523 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 MANEAQ5SRI9 462 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 ATG14Q6ZNE5 492 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 FAM20CQ8IXL6 584 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 DDIASQ8IXT1 998 aa12.69□□□□□ -0.38
SNX12-205ENST00000490561 RERGQ96A58 199 aaPredicted RBP12.69□□□□□ -0.38
SNX12-205ENST00000490561 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms