RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SLCO2A1Q92959 643 aa6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 IMP4Q96G21 291 aaKnown RBP6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 SELENOSQ9BQE4 189 aa6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 C19orf24Q9BVV8 132 aa6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 TGIF2Q9GZN2 237 aa6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 TRIM45Q9H8W5 580 aaPredicted RBP6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 PNPLA3Q9NST1 481 aa6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 C14orf105Q9NVL8 296 aa6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 STOX2Q9P2F5 926 aaPredicted RBP6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 ZDHHC9Q9Y397 364 aa6.68□□□□□ -1.34
PDLIM1-203ENST00000490391 MBD3L4A6NDZ8 208 aaPredicted RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 MBD3L5A6NJ08 208 aaPredicted RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 KCNK1O00180 336 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 IFRD1O00458 451 aaPredicted RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 BIN1O00499 593 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 DDX3XO00571 662 aaKnown RBP eCLIP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 PRMT3O60678 531 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 RNF8O76064 485 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 GOSR1O95249 250 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 CNOT4O95628 575 aaKnown RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 NDST3O95803 873 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 HEXBP07686 556 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 RARAP10276 462 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 EPB42P16452 691 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 PCK1P35558 622 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 PRKCIP41743 596 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 IFI35P80217 286 aaPredicted RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 OC90Q02509 493 aaPredicted RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 DMTNQ08495 405 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 MESDQ14696 234 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 PAFAH1B3Q15102 231 aaKnown RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 NOMO1Q15155 1222 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 IFI16Q16666 785 aaKnown RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 BTBD16Q32M84 506 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 BOLA3Q53S33 107 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 FIGNQ5HY92 759 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 WASHC2DQ5SRD0 308 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 ZDHHC20Q5W0Z9 365 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 FBXW10Q5XX13 1052 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 NCBP2-AS2Q69YL0 99 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 FRMPD2BQ6IN97 320 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 LANCL3Q6ZV70 420 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 ZC3H7AQ8IWR0 971 aaKnown RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 ELOA2Q8IYF1 753 aaPredicted RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 HORMAD2Q8N7B1 307 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 LINC01555Q8NAE3 123 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 ZFP62Q8NB50 900 aaPredicted RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 OR52N2Q8NGI0 321 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 PPP1R14CQ8TAE6 165 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 HSPH1Q92598 858 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 RNASE6Q93091 150 aaKnown RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 TIGD1Q96MW7 591 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 SRPK1Q96SB4 655 aaKnown RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 PLA2G12AQ9BZM1 189 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 KCNK13Q9HB14 408 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 PRM3Q9NNZ6 103 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 HAUS2Q9NVX0 235 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 TRPC4Q9UBN4 977 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 DMGDHQ9UI17 866 aaKnown RBP6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 RWDD2AQ9UIY3 292 aa6.67□□□□□ -1.34
PDLIM1-203ENST00000490391 KIAA1549Q9HCM3 1950 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 HEATR5BQ9P2D3 2071 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 LOC105369274A0A096LPK9 316 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 LOC102723532A0A0G2JNH3 316 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 AGAP14A8MT82 685 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 ISM1B1AKI9 464 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 NPIPA2E9PIF3 369 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 NPIPA3F8WFD2 350 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 EPHB6O15197 1021 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 BUD23O43709 281 aaKnown RBP6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 NRP2O60462 931 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 SRPX2O60687 465 aaPredicted RBP6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 PDE9AO76083 593 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 SOX30O94993 753 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 CD48P09326 243 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 C8orf89P0DMQ9 161 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 ACADLP28330 430 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 PKLRP30613 574 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 SLC26A3P40879 764 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 ASCL1P50553 236 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 VSX2P58304 361 aaPredicted RBP6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 GBE1Q04446 702 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 SLC10A2Q12908 348 aaPredicted RBP6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 RPA4Q13156 261 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 POU4F3Q15319 338 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 SLC14A2Q15849 920 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 MSMPQ1L6U9 139 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 MUM1Q2TAK8 710 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 PRTGQ2VWP7 1150 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 FILIP1LQ4L180 1135 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 ZC3H12BQ5HYM0 836 aaKnown RBP6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 CCDC183Q5T5S1 534 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 FIGLAQ6QHK4 219 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 CPEB2Q7Z5Q1 589 aaKnown RBP6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 SULF2Q8IWU5 870 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 OR4N4Q8N0Y3 316 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 SHISA5Q8N114 240 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 LMNTD1Q8N9Z9 388 aa6.66□□□□□ -1.34
PDLIM1-203ENST00000490391 OR5M9Q8NGP3 310 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms