RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 SMYD2Q9NRG4 433 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 SEMA3GQ9NS98 782 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 FBXL4Q9UKA2 621 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 IKZF3Q9UKT9 509 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 HS3ST3B1Q9Y662 390 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 MASP2O00187 686 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 GUCA1CO95843 209 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 STATHP02808 62 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 ANXA5P08758 320 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 ZGLP1P0C6A0 271 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 CDH1P12830 882 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 TAS2R39P59534 338 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 CKAP4Q07065 602 aaKnown RBP18.79■□□□□ 0.6
SMC4-222ENST00000490207 KLC1Q07866 573 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 DSG2Q14126 1118 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 MYBPC3Q14896 1274 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 NDUFA9Q16795 377 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 TUBB8Q3ZCM7 444 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 NADK2Q4G0N4 442 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 TMEM207Q6UWW9 146 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 VN1R4Q7Z5H5 301 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 PRSS58Q8IYP2 241 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 ARHGEF39Q8N4T4 335 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 NKAPQ8N5F7 415 aaKnown RBP18.79■□□□□ 0.6
SMC4-222ENST00000490207 OR56A3Q8NH54 315 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 ATL1Q8WXF7 558 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 CDKL2Q92772 493 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 PYCR2Q96C36 320 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 FBXL8Q96CD0 374 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 MMABQ96EY8 250 aaPredicted RBP18.79■□□□□ 0.6
SMC4-222ENST00000490207 HAUS8Q9BT25 410 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 YIPF2Q9BWQ6 316 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 PHACTR1Q9C0D0 580 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 ATP13A2Q9NQ11 1180 aa18.79■□□□□ 0.6
SMC4-222ENST00000490207 NOVA2Q9UNW9 492 aaKnown RBP18.79■□□□□ 0.6
SMC4-222ENST00000490207 IGLV3-12A0A075B6K2 115 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 NPEPPSL1A6NEC2 478 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 KLHL41O60662 606 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 ALOX12BO75342 701 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 PIAS1O75925 651 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 GRK3P35626 688 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 PLTPP55058 493 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 FOXK1P85037 733 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 CAV1Q03135 178 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 ILF2Q12905 390 aaKnown RBP18.78■□□□□ 0.6
SMC4-222ENST00000490207 VWA2Q5GFL6 755 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 THAP11Q96EK4 314 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 VPS50Q96JG6 964 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 C16orf45Q96MC5 204 aaPredicted RBP18.78■□□□□ 0.6
SMC4-222ENST00000490207 MCMBPQ9BTE3 642 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 C14orf105Q9NVL8 296 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 TRPC4Q9UBN4 977 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 UBR5O95071 2799 aaPredicted RBP18.78■□□□□ 0.6
SMC4-222ENST00000490207 MYO18BQ8IUG5 2567 aa18.78■□□□□ 0.6
SMC4-222ENST00000490207 KCNE1BA0A087WTH5 132 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 A0A0A6YYC8 382 aaPredicted RBP18.77■□□□□ 0.6
SMC4-222ENST00000490207 TCRBV9S1A1TA0A576 114 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 FEZF1A0PJY2 475 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 I3L1I5 382 aaPredicted RBP18.77■□□□□ 0.6
SMC4-222ENST00000490207 FFAR3O14843 346 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 GPR42O15529 346 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 FOXS1O43638 330 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 ALPPP05187 535 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 NPPBP16860 134 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 ITGA3P26006 1051 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 SLC26A3P40879 764 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 BCL6P41182 706 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 SLC12A2P55011 1212 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 MLLT10P55197 1068 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 AIMP2Q13155 320 aaKnown RBP18.77■□□□□ 0.6
SMC4-222ENST00000490207 FAM53BQ14153 422 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 IGFBP7Q16270 282 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 PPP1R3AQ16821 1122 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 ZXDCQ2QGD7 858 aaPredicted RBP18.77■□□□□ 0.6
SMC4-222ENST00000490207 KIRREL2Q6UWL6 708 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 CCDC25Q86WR0 208 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 CEP97Q8IW35 865 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 AMER3Q8N944 861 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 FBXO25Q8TCJ0 367 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 ANKRD7Q92527 254 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 POPDC3Q9HBV1 291 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 GPAMQ9HCL2 828 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 MKKSQ9NPJ1 570 aaPredicted RBP18.77■□□□□ 0.6
SMC4-222ENST00000490207 C5AR2Q9P296 337 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 TXNDC16Q9P2K2 825 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 C3orf18Q9UK00 162 aa18.77■□□□□ 0.6
SMC4-222ENST00000490207 MRPS2Q9Y399 296 aaKnown RBP18.77■□□□□ 0.6
SMC4-222ENST00000490207 CXorf49A8MYA2 514 aaPredicted RBP18.76■□□□□ 0.59
SMC4-222ENST00000490207 CDC7O00311 574 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 MAP2K7O14733 419 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 GSTA2P09210 222 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 AVPR1BP47901 424 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 SOX8P57073 446 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 POU4F1Q01851 419 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 FRA10AC1Q70Z53 315 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 ADAMTSL2Q86TH1 951 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 ASPGQ86U10 573 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 CAMKVQ8NCB2 501 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 OR11G2Q8NGC1 345 aa18.76■□□□□ 0.59
SMC4-222ENST00000490207 MIB2Q96AX9 1013 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms