RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-215	ENST00000490140	ZKSCAN5	Q9Y2L8	839 aa		11.17	□□□□□ -0.62
FDPS-215	ENST00000490140	REXO2	Q9Y3B8	237 aa	Known RBP	11.17	□□□□□ -0.62
FDPS-215	ENST00000490140		A0A0A6YYC8	382 aa	Predicted RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	TCRBV7S2A1N4T	A0A589	114 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	ARHGEF33	A8MVX0	844 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140		I3L1I5	382 aa	Predicted RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	SMAP	O00193	183 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	KIF5C	O60282	957 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	VAPB	O95292	243 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	MED26	O95402	600 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	NSA2	O95478	260 aa	Known RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	ENO3	P13929	434 aa	Predicted RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	EEF1D	P29692	281 aa	Known RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	FMO4	P31512	558 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	TAS2R50	P59544	299 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	RPS15A	P62244	130 aa	Known RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	FASTK	Q14296	549 aa	Known RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	GBX1	Q14549	363 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	HKDC1	Q2TB90	917 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	BTBD16	Q32M84	506 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	MINDY4	Q4G0A6	757 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	CTSL3P	Q5NE16	218 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	PLAG1	Q6DJT9	500 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	ZNF425	Q6IV72	752 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	LRRC8E	Q6NSJ5	796 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	FBXO42	Q6P3S6	717 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	SUSD1	Q6UWL2	747 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	RAD9B	Q6WBX8	426 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	SLC5A8	Q8N695	610 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	THAP3	Q8WTV1	239 aa	Predicted RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	LPGAT1	Q92604	370 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	LURAP1	Q96LR2	239 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	OR2A5	Q96R48	311 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	UTP23	Q9BRU9	249 aa	Known RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	KIFC1	Q9BW19	673 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	PCBD2	Q9H0N5	130 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	INTS10	Q9NVR2	710 aa	Known RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	SAMD15	Q9P1V8	674 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	SH3BGRL2	Q9UJC5	107 aa		11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	TSR3	Q9UJK0	312 aa	Known RBP	11.16	□□□□□ -0.62
FDPS-215	ENST00000490140	DCHS2	Q6V1P9	2916 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	GOLGA6L6	A8MZA4	724 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	ZBTB14	O43829	449 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	NRP2	O60462	931 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	NIPSNAP2	O75323	286 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	SLC16A8	O95907	504 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	F10	P00742	488 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	CD46	P15529	392 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	CAPN3	P20807	821 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	GRK3	P35626	688 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	ZNF75D	P51815	510 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	SNX1	Q13596	522 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	MEP1A	Q16819	746 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	KLHL38	Q2WGJ6	581 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	ACER2	Q5QJU3	275 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	NIPAL1	Q6NVV3	410 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	C1orf54	Q8WWF1	131 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	THAP11	Q96EK4	314 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	IMMP1L	Q96LU5	166 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	BIRC8	Q96P09	236 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	MESP1	Q9BRJ9	268 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	VN1R1	Q9GZP7	353 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	KLHL42	Q9P2K6	505 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	COMMD10	Q9Y6G5	202 aa		11.15	□□□□□ -0.62
FDPS-215	ENST00000490140	CSMD2	Q7Z408	3487 aa		11.15	□□□□□ -0.63
FDPS-215	ENST00000490140	CACNA1C	Q13936	2221 aa		11.15	□□□□□ -0.63
FDPS-215	ENST00000490140	SCN2A	Q99250	2005 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	KRT87P	A6NCN2	255 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	PABPN1L	A6NDY0	278 aa	Known RBP	11.14	□□□□□ -0.63
FDPS-215	ENST00000490140		A8MUI8	341 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	EIF3F	O00303	357 aa	Predicted RBP	11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	FFAR3	O14843	346 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	GPR42	O15529	346 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	FOXS1	O43638	330 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	SEC24D	O94855	1032 aa	Predicted RBP	11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	SYF2	O95926	243 aa	Known RBP	11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	SLC35G6	P0C7Q6	338 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	ABO	P16442	354 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	TPSB2	P20231	275 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	IL10	P22301	178 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	NMBR	P28336	390 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	GRN	P28799	593 aa	Known RBP	11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	XCR1	P46094	333 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	CRADD	P78560	199 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	ALDH6A1	Q02252	535 aa	Known RBP	11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	TPSAB1	Q15661	275 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	CCNG2	Q16589	344 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	CASC4	Q6P4E1	433 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	PCGF5	Q86SE9	256 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	LMNTD2	Q8IXW0	634 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	LGI4	Q8N135	537 aa		11.14	□□□□□ -0.63
FDPS-215	ENST00000490140	CAMKV	Q8NCB2	501 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms