RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TRAPPC5Q8IUR0 188 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 CPXM2Q8N436 756 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 FNDC8Q8TC99 324 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 STOX2Q9P2F5 926 aaPredicted RBP15.18■□□□□ 0.02
BRD9-208ENST00000489816 GMPPBQ9Y5P6 360 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 BOLA2-SMG1P6H3BVE0 249 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 BCAS1O75363 584 aaPredicted RBP15.18■□□□□ 0.02
BRD9-208ENST00000489816 CBSLP0DN79 551 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 JUPP14923 745 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 TIMP2P16035 220 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 POLR2EP19388 210 aaKnown RBP15.18■□□□□ 0.02
BRD9-208ENST00000489816 CBSP35520 551 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 CLK3P49761 638 aaKnown RBP15.18■□□□□ 0.02
BRD9-208ENST00000489816 VBP1P61758 197 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 PHEXP78562 749 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 TMEM115Q12893 351 aaPredicted RBP15.18■□□□□ 0.02
BRD9-208ENST00000489816 GAB1Q13480 694 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 PTOV1Q86YD1 416 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 SLC44A2Q8IWA5 706 aaPredicted RBP15.18■□□□□ 0.02
BRD9-208ENST00000489816 IL17FQ96PD4 163 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 KCNC2Q96PR1 638 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 PKP4Q99569 1192 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 HEPHQ9BQS7 1158 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 DUSP26Q9BV47 211 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 C8orf4Q9NR00 106 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 TDP1Q9NUW8 608 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 TMEM184CQ9NVA4 438 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 TRIOO75962 3097 aa15.18■□□□□ 0.02
BRD9-208ENST00000489816 COL4A6Q14031 1691 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 SEC14L2O76054 403 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 PRPS1L1P21108 318 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 CSNK1DP48730 415 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 GP2P55259 537 aaKnown RBP15.17■□□□□ 0.02
BRD9-208ENST00000489816 POLR2LP62875 67 aaKnown RBP15.17■□□□□ 0.02
BRD9-208ENST00000489816 COX20Q5RI15 118 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 TTC29Q8NA56 475 aaPredicted RBP15.17■□□□□ 0.02
BRD9-208ENST00000489816 ZNF540Q8NDQ6 660 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 PIK3C3Q8NEB9 887 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 OR7G3Q8NG95 312 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 HDAC2Q92769 488 aaKnown RBP15.17■□□□□ 0.02
BRD9-208ENST00000489816 RPL3LQ92901 407 aaKnown RBP15.17■□□□□ 0.02
BRD9-208ENST00000489816 CIDECQ96AQ7 238 aaPredicted RBP15.17■□□□□ 0.02
BRD9-208ENST00000489816 PLEKHA8Q96JA3 519 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 TRIM39Q9HCM9 518 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.17■□□□□ 0.02
BRD9-208ENST00000489816 WNT9AO14904 365 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 CPNE6O95741 557 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 NPTX1Q15818 432 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 ZNF284Q2VY69 593 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 UAP1L1Q3KQV9 507 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 PERM1Q5SV97 790 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 MPP7Q5T2T1 576 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 AHSA2Q719I0 299 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 B3GNT8Q7Z7M8 397 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 ZZZ3Q8IYH5 903 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 SVOPLQ8N434 492 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 L3MBTL4Q8NA19 623 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 LMLNQ96KR4 655 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 SPHK2Q9NRA0 654 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 SELENONQ9NZV5 590 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 SPASTQ9UBP0 616 aa15.17■□□□□ 0.02
BRD9-208ENST00000489816 IGLV3-16A0A075B6K0 115 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 SCN2BO60939 215 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 CCNDBP1O95273 360 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 FABP3P05413 133 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 ELFN1P0C7U0 828 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 ETFAP13804 333 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 IMPA1P29218 277 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 ARHGDIAP52565 204 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 NUDT6P53370 316 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 CPTPQ5TA50 214 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 ZNF691Q5VV52 312 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 TRMT11Q7Z4G4 463 aaKnown RBP15.16■□□□□ 0.02
BRD9-208ENST00000489816 SMYD1Q8NB12 490 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 OR2AG1Q9H205 316 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 IL1RAPQ9NPH3 570 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 PSME2Q9UL46 239 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 ERVW-1Q9UQF0 538 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 HNMTP50135 292 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 SYT16Q17RD7 645 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 GRASPQ7Z6J2 395 aaPredicted RBP15.16■□□□□ 0.02
BRD9-208ENST00000489816 PLPP6Q8IY26 295 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 ZNF420Q8TAQ5 688 aaPredicted RBP15.16■□□□□ 0.02
BRD9-208ENST00000489816 NDNFQ8TB73 568 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 GLMNQ92990 594 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 ALOXE3Q9BYJ1 711 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 SPNS1Q9H2V7 528 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 MAP4K5Q9Y4K4 846 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 SYN1P17600 705 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 TTKP33981 857 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 GBX1Q14549 363 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 NR1D2Q14995 579 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 ZNF385BQ569K4 471 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 RBM48Q5RL73 367 aaKnown RBP15.16■□□□□ 0.02
BRD9-208ENST00000489816 TMEM236Q5W0B7 351 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 GTF2IRD2BQ6EKJ0 949 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 GTF2IRD2Q86UP8 949 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 HIPK1Q86Z02 1210 aa15.16■□□□□ 0.02
BRD9-208ENST00000489816 CLP1Q92989 425 aaKnown RBP15.16■□□□□ 0.02
BRD9-208ENST00000489816 EMILIN2Q9BXX0 1053 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms