RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CAPS2Q9BXY5 557 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 CNOT10Q9H9A5 744 aaKnown RBP16.55■□□□□ 0.24
MDC1-206ENST00000489540 SNX15Q9NRS6 342 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 IGSF5Q9NSI5 407 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 RNF112Q9ULX5 631 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 CDC14AQ9UNH5 594 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 SH2B3Q9UQQ2 575 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 RUVBL1Q9Y265 456 aaKnown RBP16.55■□□□□ 0.24
MDC1-206ENST00000489540 SLC22A14Q9Y267 594 aa16.55■□□□□ 0.24
MDC1-206ENST00000489540 NCF1BA6NI72 391 aaPredicted RBP16.54■□□□□ 0.24
MDC1-206ENST00000489540 EIF4E1BA6NMX2 242 aaKnown RBP16.54■□□□□ 0.24
MDC1-206ENST00000489540 NCF1CA8MVU1 366 aaPredicted RBP16.54■□□□□ 0.24
MDC1-206ENST00000489540 POC1B-GALNT4F8VUJ3 575 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 S100BP04271 92 aaPredicted RBP16.54■□□□□ 0.24
MDC1-206ENST00000489540 FAM153BP0C7A2 387 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 SFTPCP11686 197 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 NCF1P14598 390 aaPredicted RBP16.54■□□□□ 0.24
MDC1-206ENST00000489540 TFEBP19484 476 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 GGT5P36269 586 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 CSRP3P50461 194 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 DLG1Q12959 904 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 OR4D1Q15615 310 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 NDUFA9Q16795 377 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 FAM153CQ494X1 144 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 ATP1A1-AS1Q5TC04 95 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 LGSNQ5TDP6 509 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 MRPL14Q6P1L8 145 aaKnown RBP16.54■□□□□ 0.24
MDC1-206ENST00000489540 CAMKVQ8NCB2 501 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 UHMK1Q8TAS1 419 aaKnown RBP16.54■□□□□ 0.24
MDC1-206ENST00000489540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.54■□□□□ 0.24
MDC1-206ENST00000489540 SLC39A7Q92504 469 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 BBC3Q96PG8 261 aaPredicted RBP16.54■□□□□ 0.24
MDC1-206ENST00000489540 SARGQ9BW04 601 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 ALG9Q9H6U8 611 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 ZNF304Q9HCX3 659 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 SLC22A11Q9NSA0 550 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 CD274Q9NZQ7 290 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 SEC16AO15027 2179 aa16.54■□□□□ 0.24
MDC1-206ENST00000489540 A0A096LPK6 155 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 RIPK2O43353 540 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 KLF7O75840 302 aaPredicted RBP16.53■□□□□ 0.24
MDC1-206ENST00000489540 IPO13O94829 963 aaKnown RBP16.53■□□□□ 0.24
MDC1-206ENST00000489540 FURINP09958 794 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 ITGAXP20702 1163 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 SLC6A12P48065 614 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 NFKB2Q00653 900 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 FAM53BQ14153 422 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 SSPNQ14714 243 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 HKDC1Q2TB90 917 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 CNPY4Q8N129 248 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 MFSD9Q8NBP5 474 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 RHEBL1Q8TAI7 183 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 NEIL2Q969S2 332 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 NXNL1Q96CM4 212 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 C10orf90Q96M02 699 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 TXLNGYQ9BZA5 131 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 SLC26A1Q9H2B4 701 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 SYNPO2LQ9H987 977 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 PELI2Q9HAT8 420 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 WWOXQ9NZC7 414 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 PTBP2Q9UKA9 531 aaKnown RBP16.53■□□□□ 0.24
MDC1-206ENST00000489540 ITPR1Q14643 2758 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 EXOC1LA0A1B0GW35 172 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 TRBC2A0A5B9 178 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 FEZF1A0PJY2 475 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 ESPNB1AK53 854 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 PRPF4O43172 522 aaKnown RBP eCLIP16.53■□□□□ 0.24
MDC1-206ENST00000489540 LCMT2O60294 686 aaKnown RBP16.53■□□□□ 0.24
MDC1-206ENST00000489540 KERAO60938 352 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 STK16O75716 305 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 WDR47O94967 919 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 ALDOAP04075 364 aaKnown RBP16.53■□□□□ 0.24
MDC1-206ENST00000489540 GNAZP19086 355 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 TNFRSF8P28908 595 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 BCL6P41182 706 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 FOLR3P41439 243 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 OR1D4P47884 311 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 KCNC1P48547 511 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 IL10RAQ13651 578 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 COL9A2Q14055 689 aaPredicted RBP16.53■□□□□ 0.24
MDC1-206ENST00000489540 SLC9A5Q14940 896 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 ACAP2Q15057 778 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 CATSPEREQ5SY80 951 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 KLC3Q6P597 504 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 NXPE4Q6UWF7 544 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 VN1R4Q7Z5H5 301 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 PDPRQ8NCN5 879 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 OR2Y1Q8NGV0 311 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 DCAKDQ8WVC6 231 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 KCTD4Q8WVF5 259 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 SLC13A3Q8WWT9 602 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 ISL2Q96A47 359 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 COL26A1Q96A83 441 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 TM4SF19Q96DZ7 209 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 IP6K3Q96PC2 410 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 ADNPQ9H2P0 1102 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 WDR54Q9H977 334 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 GPRC5BQ9NZH0 403 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 NUDT4Q9NZJ9 180 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 NXT1Q9UKK6 140 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms