RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 DRC3Q9H069 523 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 ILKAPQ9H0C8 392 aaPredicted RBP21.87■■□□□ 1.09
COL9A3-213ENST00000489045 ATG10Q9H0Y0 220 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 SH2B3Q9UQQ2 575 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 TEX264Q9Y6I9 313 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 MAST4O15021 2626 aa21.87■■□□□ 1.09
COL9A3-213ENST00000489045 A0A0A6YYC8 382 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-213ENST00000489045 I3L1I5 382 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-213ENST00000489045 MAP2K7O14733 419 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 SLC16A5O15375 505 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 FOXS1O43638 330 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 SEC31AO94979 1220 aaKnown RBP21.86■■□□□ 1.09
COL9A3-213ENST00000489045 TSPAN12O95859 305 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 ANXA5P08758 320 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 HRH2P25021 359 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 SLC26A3P40879 764 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 PGGT1BP53609 377 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 Q0VFX4 171 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 PDAP1Q13442 181 aaKnown RBP21.86■■□□□ 1.09
COL9A3-213ENST00000489045 STEAP4Q687X5 459 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 ALKBH8Q96BT7 664 aaKnown RBP21.86■■□□□ 1.09
COL9A3-213ENST00000489045 LRRC39Q96DD0 335 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 C19orf60Q96EN9 201 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 TRIM31Q9BZY9 425 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 LHPPQ9H008 270 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 PCBD2Q9H0N5 130 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 C14orf105Q9NVL8 296 aa21.86■■□□□ 1.09
COL9A3-213ENST00000489045 MRPS2Q9Y399 296 aaKnown RBP21.86■■□□□ 1.09
COL9A3-213ENST00000489045 SPTAN1Q13813 2472 aaKnown RBP21.86■■□□□ 1.09
COL9A3-213ENST00000489045 IDSB3KWA1 339 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 CCDC188H7C350 402 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 HPP00738 406 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 VARSP26640 1264 aaKnown RBP21.85■■□□□ 1.09
COL9A3-213ENST00000489045 ARL4CP56559 192 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 IL2P60568 153 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 RPS15AP62244 130 aaKnown RBP21.85■■□□□ 1.09
COL9A3-213ENST00000489045 SNRPNP63162 240 aaKnown RBP21.85■■□□□ 1.09
COL9A3-213ENST00000489045 NAE1Q13564 534 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 SYT16Q17RD7 645 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 HECTD2Q5U5R9 776 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 AGAP7PQ5VUJ5 663 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 ATG9BQ674R7 924 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 VN1R4Q7Z5H5 301 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 C17orf64Q86WR6 236 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 ANKMY2Q8IV38 441 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 SNRNP40Q96DI7 357 aaKnown RBP21.85■■□□□ 1.09
COL9A3-213ENST00000489045 SNF8Q96H20 258 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 THOC3Q96J01 351 aaKnown RBP21.85■■□□□ 1.09
COL9A3-213ENST00000489045 AGAP4Q96P64 663 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 SLC29A3Q9BZD2 475 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 ZNF160Q9HCG1 818 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 MKKSQ9NPJ1 570 aaPredicted RBP21.85■■□□□ 1.09
COL9A3-213ENST00000489045 CORO1CQ9ULV4 474 aaPredicted RBP21.85■■□□□ 1.09
COL9A3-213ENST00000489045 CSAG2Q9Y5P2 127 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 SCN3AQ9NY46 2000 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 CNTRLQ7Z7A1 2325 aa21.85■■□□□ 1.09
COL9A3-213ENST00000489045 TCP11X1B4DZS4 312 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 FANCGO15287 622 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 FDXRP22570 491 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 PAFAH1B1P43034 410 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 EMP2P54851 167 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 CSNK1G2P78368 415 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 FAM53BQ14153 422 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 NDUFA9Q16795 377 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 FAM45BPQ6NSW5 357 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 Q6ZS92 163 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 CUZD1Q86UP6 607 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 CISD2Q8N5K1 135 aaKnown RBP21.84■■□□□ 1.09
COL9A3-213ENST00000489045 FAM45AQ8TCE6 357 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 OLFM1Q99784 485 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 WDR77Q9BQA1 342 aaPredicted RBP21.84■■□□□ 1.09
COL9A3-213ENST00000489045 SGPP1Q9BX95 441 aa21.84■■□□□ 1.09
COL9A3-213ENST00000489045 TP73O15350 636 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 HIST1H2AGP0C0S8 130 aaPredicted RBP21.83■■□□□ 1.09
COL9A3-213ENST00000489045 COX6A1P12074 109 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 HIST1H2ADP20671 130 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 CCND1P24385 295 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 MAT1AQ00266 395 aaKnown RBP21.83■■□□□ 1.09
COL9A3-213ENST00000489045 MRPL49Q13405 166 aaKnown RBP21.83■■□□□ 1.09
COL9A3-213ENST00000489045 FAAH2Q6GMR7 532 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 LCTLQ6UWM7 567 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 IGFL2Q6UWQ7 119 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 ZC3H7AQ8IWR0 971 aaKnown RBP21.83■■□□□ 1.09
COL9A3-213ENST00000489045 PPP4R1Q8TF05 950 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 HIST1H2AHQ96KK5 128 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 HIST1H2AJQ99878 128 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 H2AFJQ9BTM1 129 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 TGIF2Q9GZN2 237 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 ASF1BQ9NVP2 202 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 ARL15Q9NXU5 204 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 VWA7Q9Y334 891 aa21.83■■□□□ 1.09
COL9A3-213ENST00000489045 HIVEP3Q5T1R4 2406 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 KCNE1BA0A087WTH5 132 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 NSG1A0A0A6YYJ2 146 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 FEZF1A0PJY2 475 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 PABPN1LA6NDY0 278 aaKnown RBP21.82■■□□□ 1.08
COL9A3-213ENST00000489045 EFCAB8A8MWE9 144 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 HEXBP07686 556 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 CDH1P12830 882 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 CXCR2P25025 360 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms