RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 NCSTNQ92542 709 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 GFM1Q96RP9 751 aaKnown RBP18.66■□□□□ 0.58
CCM2-216ENST00000488727 EPB41L1Q9H4G0 881 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 UTP6Q9NYH9 597 aaKnown RBP18.66■□□□□ 0.58
CCM2-216ENST00000488727 TMEM9Q9P0T7 183 aa18.66■□□□□ 0.58
CCM2-216ENST00000488727 PTPRBP23467 1997 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 FAM221BA6H8Z2 402 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 D6RAR5 112 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 UBFD1O14562 309 aaKnown RBP18.65■□□□□ 0.58
CCM2-216ENST00000488727 AIM2O14862 343 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 MAP3K7O43318 606 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 SKAP2O75563 359 aaPredicted RBP18.65■□□□□ 0.58
CCM2-216ENST00000488727 SNRNP200O75643 2136 aaKnown RBP18.65■□□□□ 0.58
CCM2-216ENST00000488727 CPNE6O95741 557 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 ERGP11308 486 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 MTHFD2P13995 350 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 HOXB3P14651 431 aaPredicted RBP18.65■□□□□ 0.58
CCM2-216ENST00000488727 PPM1FP49593 454 aaPredicted RBP18.65■□□□□ 0.58
CCM2-216ENST00000488727 PDX1P52945 283 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 GFERP55789 205 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 SPIDRQ14159 915 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 ZNF574Q6ZN55 896 aaPredicted RBP18.65■□□□□ 0.58
CCM2-216ENST00000488727 ADAMTSL2Q86TH1 951 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 C2orf73Q8N5S3 287 aaPredicted RBP18.65■□□□□ 0.58
CCM2-216ENST00000488727 PTGR2Q8N8N7 351 aaPredicted RBP18.65■□□□□ 0.58
CCM2-216ENST00000488727 RCN3Q96D15 328 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 TWSG1Q9GZX9 223 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 YY1AP1Q9H869 796 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 HRASLS2Q9NWW9 162 aa18.65■□□□□ 0.58
CCM2-216ENST00000488727 G3BP2Q9UN86 482 aaKnown RBP18.65■□□□□ 0.58
CCM2-216ENST00000488727 KDM1AO60341 852 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 SUPT7LO94864 414 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 FGF4P08620 206 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 ENO2P09104 434 aaPredicted RBP18.64■□□□□ 0.57
CCM2-216ENST00000488727 CD1EP15812 388 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 POLR2CP19387 275 aaPredicted RBP18.64■□□□□ 0.57
CCM2-216ENST00000488727 ID4P47928 161 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 FASTKQ14296 549 aaKnown RBP18.64■□□□□ 0.57
CCM2-216ENST00000488727 BNC2Q6ZN30 1099 aaPredicted RBP18.64■□□□□ 0.57
CCM2-216ENST00000488727 OOSP2Q86WS3 158 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 HPS6Q86YV9 775 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 OR2L8Q8NGY9 312 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 STAG3L4Q8TBR4 150 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 ZNF480Q8WV37 535 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 EFCAB1Q9HAE3 211 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 SPHK1Q9NYA1 384 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 OR6C2Q9NZP2 312 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 SPATA7Q9P0W8 599 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 OARD1Q9Y530 152 aa18.64■□□□□ 0.57
CCM2-216ENST00000488727 GUCA1CO95843 209 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 CHRM5P08912 532 aaPredicted RBP18.63■□□□□ 0.57
CCM2-216ENST00000488727 CDK4P11802 303 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 IMPA1P29218 277 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 PEBP1P30086 187 aaKnown RBP18.63■□□□□ 0.57
CCM2-216ENST00000488727 CYP2A13Q16696 494 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 ZXDCQ2QGD7 858 aaPredicted RBP18.63■□□□□ 0.57
CCM2-216ENST00000488727 CDCP2Q5VXM1 449 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 KLHL35Q6PF15 583 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 WDR74Q6RFH5 385 aaPredicted RBP18.63■□□□□ 0.57
CCM2-216ENST00000488727 RPS27LQ71UM5 84 aaKnown RBP18.63■□□□□ 0.57
CCM2-216ENST00000488727 CLYBLQ8N0X4 340 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 WDR48Q8TAF3 677 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 MARK4Q96L34 752 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 RAB11FIP5Q9BXF6 653 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 RAB33BQ9H082 229 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 ARL15Q9NXU5 204 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 STOX2Q9P2F5 926 aaPredicted RBP18.63■□□□□ 0.57
CCM2-216ENST00000488727 LRCH1Q9Y2L9 728 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 MN1Q10571 1320 aaPredicted RBP18.63■□□□□ 0.57
CCM2-216ENST00000488727 UBXN8O00124 270 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 UBDO15205 165 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 CAPN5O15484 640 aaPredicted RBP18.63■□□□□ 0.57
CCM2-216ENST00000488727 HIST1H2AGP0C0S8 130 aaPredicted RBP18.63■□□□□ 0.57
CCM2-216ENST00000488727 HIST1H2ADP20671 130 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 AP1S2P56377 157 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 TGFBIQ15582 683 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 UGT3A2Q3SY77 523 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 PIGGQ5H8A4 983 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 HES3Q5TGS1 186 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 ANKS6Q68DC2 871 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 B3GNT8Q7Z7M8 397 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 HMGCLL1Q8TB92 370 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 ADAMTS14Q8WXS8 1223 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 HIST1H2AHQ96KK5 128 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 CCDC138Q96M89 665 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 HIST1H2AJQ99878 128 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 H2AFJQ9BTM1 129 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 C1QTNF3Q9BXJ4 246 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 EPHA6Q9UF33 1036 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 TMCO1Q9UM00 188 aa18.63■□□□□ 0.57
CCM2-216ENST00000488727 PCM1Q15154 2024 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 PIPSLA2A3N6 862 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 SYCE1LA8MT33 242 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 KLK8O60259 260 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 SORBS2O94875 1100 aaKnown RBP18.62■□□□□ 0.57
CCM2-216ENST00000488727 C9P02748 559 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 PNLIPRP1P54315 467 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 BLMHQ13867 455 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 ARHGAP19Q14CB8 494 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 IRGCQ6NXR0 463 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms