RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 GMPSP49915 693 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 SP3Q02447 781 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 KLC1Q07866 573 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 BMP2KLQ5H9B9 411 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 FFAR4Q5NUL3 377 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 RNASEH2BQ5TBB1 312 aaKnown RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 NAA16Q6N069 864 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 TEX38Q6PEX7 206 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 SLC16A9Q7RTY1 509 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 ADIPOR2Q86V24 386 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 POGLUT1Q8NBL1 392 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 OR13C3Q8NGS6 347 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 GRHL3Q8TE85 626 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 PHLDA1Q8WV24 401 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 SPDL1Q96EA4 605 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 GMPPAQ96IJ6 420 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 MAGED4Q96JG8 741 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 ART5Q96L15 291 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 OPRPNQ99935 248 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 LAT2Q9GZY6 243 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 NOL11Q9H8H0 719 aaKnown RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 TBC1D17Q9HA65 648 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 TRPV4Q9HBA0 871 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 B3GAT1Q9P2W7 334 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 C19orf25Q9UFG5 118 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 SWAP70Q9UH65 585 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 ANAPC2Q9UJX6 822 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 CPSF3Q9UKF6 684 aaKnown RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 MAN1B1Q9UKM7 699 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 MAGED1Q9Y5V3 778 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 TTC21BQ7Z4L5 1316 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 RAB3GAP2Q9H2M9 1393 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 BRWD1Q9NSI6 2320 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 NR5A2O00482 541 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 EPHB6O15197 1021 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 AHCYL1O43865 530 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 CDC123O75794 336 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 DFFBO76075 338 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 CRKLP46109 303 aaKnown RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 ASCL1P50553 236 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 BMXP51813 675 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 CSE1LP55060 971 aaKnown RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 CDH13P55290 713 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 MAZP56270 477 aaKnown RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 FKBP1BP68106 108 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 SNTB1Q13884 538 aaKnown RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 PTPRCAPQ14761 206 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 PSRC1Q6PGN9 363 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 STXBP4Q6ZWJ1 553 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 KRT74Q7RTS7 529 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 NDUFAF2Q8N183 169 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 SCML4Q8N228 414 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 TMEM178AQ8NBL3 297 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 OR13J1Q8NGT2 312 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 CFAP61Q8NHU2 1237 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 DCPSQ96C86 337 aaKnown RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 SENP5Q96HI0 755 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 KLHL4Q9C0H6 718 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 CPVLQ9H3G5 476 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 CHST11Q9NPF2 352 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 SDR39U1Q9NRG7 319 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 ATAD3AQ9NVI7 634 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 OSER1Q9NX31 292 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 CRNNQ9UBG3 495 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-214ENST00000488427 FAM169AQ9Y6X4 670 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 PLXNA3P51805 1871 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 FAM205AQ6ZU69 1335 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 KIF24Q5T7B8 1368 aa3.87□□□□□ -1.79
ITGB1-214ENST00000488427 LTBP2Q14767 1821 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 PLXNA1Q9UIW2 1896 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 TEP1Q99973 2627 aaKnown RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 IGKV3D-15A0A087WSY6 115 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 EDDM13A0A1B0GTR0 161 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 C2orf81A6NN90 581 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 ZNF197O14709 1029 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 C22orf31O95567 290 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 HSP90AA1P07900 732 aaKnown RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 FRMD6-AS1P0C7T7 363 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 CCL5P13501 91 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 MYL6BP14649 208 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 CEBPBP17676 345 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 TYMPP19971 482 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 CDH3P22223 829 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 RPL21P46778 160 aaKnown RBP3.86□□□□□ -1.79
ITGB1-214ENST00000488427 DMPKQ09013 629 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 ALCAMQ13740 583 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 PHKG1Q16816 387 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 ARMC4Q5T2S8 1044 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 WLSQ5T9L3 541 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 LCN1P1Q5VSP4 162 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 KRT39Q6A163 491 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 KRT80Q6KB66 452 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 MFSD12Q6NUT3 480 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 FAM198BQ6UWH4 519 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 OLFM4Q6UX06 510 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 G2E3Q7L622 706 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 ARHGAP24Q8N264 748 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 NPEPL1Q8NDH3 523 aa3.86□□□□□ -1.79
ITGB1-214ENST00000488427 DBF4BQ8NFT6 615 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms