RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 AKAP7Q9P0M2 348 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 PDP2Q9P2J9 529 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 ZDHHC2Q9UIJ5 367 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 BTBD3Q9Y2F9 522 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 RNF11Q9Y3C5 154 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 CABIN1Q9Y6J0 2220 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 URADA6NGE7 173 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 ANKDD1BA6NHY2 528 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 MANBAO00462 879 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 PPP6CO00743 305 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 RGS14O43566 566 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 CLEC3AO75596 197 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 LYPLA1O75608 230 aaPredicted RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 RASSF9O75901 435 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 OR4F21O95013 312 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 FAM107AO95990 144 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 MSL3P1P0C860 447 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 ALOX15P16050 662 aaPredicted RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 TSPAN8P19075 237 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 CSRP1P21291 193 aaKnown RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 MPSTP25325 297 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 PTX3P26022 381 aaPredicted RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 SCTRP47872 440 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 ARFIP1P53367 373 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 INHBCP55103 352 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 HSD11B2P80365 405 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 TGM3Q08188 693 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 PWP1Q13610 501 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 SPIDRQ14159 915 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 CATSPEREQ5SY80 951 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 GKAP1Q5VSY0 366 aaPredicted RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 CACHD1Q5VU97 1274 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 KIAA1614Q5VZ46 1190 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 NIPAL1Q6NVV3 410 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 CHSY3Q70JA7 882 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 TRIM46Q7Z4K8 759 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 PIP4P1Q86T03 277 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 PAQR7Q86WK9 346 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 C19orf47Q8N9M1 422 aaKnown RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 MFSD9Q8NBP5 474 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 SRFBP1Q8NEF9 429 aaKnown RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 OR7G3Q8NG95 312 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 SELENOMQ8WWX9 145 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 USP7Q93009 1102 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 RERGQ96A58 199 aaPredicted RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 TMEM74Q96NL1 305 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 TGM7Q96PF1 710 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 CDK15Q96Q40 435 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 GFM1Q96RP9 751 aaKnown RBP10.6□□□□□ -0.71
HDLBP-242ENST00000488013 ZFYVE21Q9BQ24 234 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 C20orf27Q9GZN8 174 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 AHSPQ9NZD4 102 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 KLHL14Q9P2G3 628 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 RAPGEFL1Q9UHV5 662 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 ZFP69BQ9UJL9 534 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 DNAJC15Q9Y5T4 150 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 USH1CQ9Y6N9 552 aa10.6□□□□□ -0.71
HDLBP-242ENST00000488013 OTOGLQ3ZCN5 2332 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 PCDH15Q96QU1 1955 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 GOLGA8QA0A0J9YX86 632 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 GOLGA8OA6NCC3 632 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 NPIPB8E9PQR5 432 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 GOLGA8NF8WBI6 632 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 NTN3O00634 580 aaPredicted RBP10.59□□□□□ -0.71
HDLBP-242ENST00000488013 ZSCAN9O15535 394 aaPredicted RBP10.59□□□□□ -0.71
HDLBP-242ENST00000488013 OR1F1O43749 312 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 RFPL3O75679 317 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 MAGP20916 626 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 VARSP26640 1264 aaKnown RBP10.59□□□□□ -0.71
HDLBP-242ENST00000488013 PSMB5P28074 263 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 ARRB2P32121 409 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 ACADVLP49748 655 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 SKP1P63208 163 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 RGS1Q08116 209 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 CSTF3Q12996 717 aaKnown RBP10.59□□□□□ -0.71
HDLBP-242ENST00000488013 RBBP5Q15291 538 aaKnown RBP10.59□□□□□ -0.71
HDLBP-242ENST00000488013 SMU1Q2TAY7 513 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 UGT3A2Q3SY77 523 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 TMEM35AQ53FP2 167 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 TCTE1Q5JU00 501 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 NKAIN2Q5VXU1 208 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 METTL21CQ5VZV1 264 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 CES4AQ5XG92 561 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 ACAD11Q709F0 780 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 USP53Q70EK8 1073 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 FAM9CQ8IZT9 166 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 ANKS4BQ8N8V4 417 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 CAMKVQ8NCB2 501 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 TWIST2Q8WVJ9 160 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 KLHL6Q8WZ60 621 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 C19orf60Q96EN9 201 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 CMTM7Q96FZ5 175 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 PPP3R2Q96LZ3 170 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 TRAPPC9Q96Q05 1148 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 CCT8L2Q96SF2 557 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 SERPINI1Q99574 410 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 SHCBP1LQ9BZQ2 653 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 ZNF768Q9H5H4 540 aaKnown RBP10.59□□□□□ -0.71
HDLBP-242ENST00000488013 MEAF6Q9HAF1 191 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms