RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 OR56A3Q8NH54 315 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 RERGQ96A58 199 aaPredicted RBP12.29□□□□□ -0.44
RPSA-208ENST00000487876 PTERQ96BW5 349 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 FBXL8Q96CD0 374 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 PDLIM5Q96HC4 596 aaKnown RBP12.29□□□□□ -0.44
RPSA-208ENST00000487876 HIST1H2AHQ96KK5 128 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 RBBP8Q99708 897 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 HIST1H2AJQ99878 128 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 MACROD1Q9BQ69 325 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 H2AFJQ9BTM1 129 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 NUDT9Q9BW91 350 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 EPN3Q9H201 632 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 SLC26A1Q9H2B4 701 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 WDR54Q9H977 334 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 LRRC4CQ9HCJ2 640 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 GPAMQ9HCL2 828 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 ZNF304Q9HCX3 659 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 ZDHHC18Q9NUE0 388 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 TMEM184CQ9NVA4 438 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 PABPN1LA6NDY0 278 aaKnown RBP12.28□□□□□ -0.44
RPSA-208ENST00000487876 J3QKU1 62 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 CEACAM4O75871 244 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 ENO2P09104 434 aaPredicted RBP12.28□□□□□ -0.44
RPSA-208ENST00000487876 FBLP22087 321 aaKnown RBP12.28□□□□□ -0.44
RPSA-208ENST00000487876 GUCY2DQ02846 1103 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 RELAQ04206 551 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 PRMT9Q6P2P2 845 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 LCTLQ6UWM7 567 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 MED25Q71SY5 747 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 PRSS41Q7RTY9 318 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 SHISA5Q8N114 240 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 NKAPQ8N5F7 415 aaKnown RBP12.28□□□□□ -0.44
RPSA-208ENST00000487876 PPM1NQ8N819 430 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 FDCSPQ8NFU4 85 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 FBF1Q8TES7 1133 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 CDKL2Q92772 493 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 COL26A1Q96A83 441 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 TSNARE1Q96NA8 513 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 GPR22Q99680 433 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 CPNE1Q99829 537 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 SLC25A23Q9BV35 468 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 PCBD2Q9H0N5 130 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 P4HTMQ9NXG6 502 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 SCN2AQ99250 2005 aa12.28□□□□□ -0.44
RPSA-208ENST00000487876 SETXQ7Z333 2677 aaKnown RBP12.27□□□□□ -0.44
RPSA-208ENST00000487876 A0A0A6YYC8 382 aaPredicted RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 VSTM2BA6NLU5 285 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 I3L1I5 382 aaPredicted RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 SOCS6O14544 535 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 FOXS1O43638 330 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 LCMT2O60294 686 aaKnown RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 ZIC2O95409 532 aaPredicted RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 ALBP02768 609 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 CD63P08962 238 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 GSTA2P09210 222 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 PIM1P11309 404 aaPredicted RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 CCND1P24385 295 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 GP5P40197 560 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 PGDP52209 483 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 RPS15AP62244 130 aaKnown RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 POU4F1Q01851 419 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 KLC1Q07866 573 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 USP10Q14694 798 aaKnown RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 SYT16Q17RD7 645 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 C18orf21Q32NC0 220 aaPredicted RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 VWA2Q5GFL6 755 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 DCAF10Q5QP82 559 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 CATSPEREQ5SY80 951 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 ATG14Q6ZNE5 492 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 CYS1Q717R9 158 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 MMGT1Q8N4V1 131 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 AMER3Q8N944 861 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 TMEM102Q8N9M5 508 aaPredicted RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 ZNF740Q8NDX6 193 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 STT3BQ8TCJ2 826 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 NEIL2Q969S2 332 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 MMABQ96EY8 250 aaPredicted RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 TRIM54Q9BYV2 358 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 SPNS1Q9H2V7 528 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 POPDC3Q9HBV1 291 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 MLXIPLQ9NP71 852 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 TXNDC16Q9P2K2 825 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 CTNNAL1Q9UBT7 734 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 DMGDHQ9UI17 866 aaKnown RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 NOVA2Q9UNW9 492 aaKnown RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 PCDHGA9Q9Y5G4 932 aaKnown RBP12.27□□□□□ -0.45
RPSA-208ENST00000487876 HS3ST3B1Q9Y662 390 aa12.27□□□□□ -0.45
RPSA-208ENST00000487876 IGLV3-12A0A075B6K2 115 aa12.26□□□□□ -0.45
RPSA-208ENST00000487876 CTAGE15A4D2H0 777 aa12.26□□□□□ -0.45
RPSA-208ENST00000487876 NCF1BA6NI72 391 aaPredicted RBP12.26□□□□□ -0.45
RPSA-208ENST00000487876 NCF1CA8MVU1 366 aaPredicted RBP12.26□□□□□ -0.45
RPSA-208ENST00000487876 AGPSO00116 658 aa12.26□□□□□ -0.45
RPSA-208ENST00000487876 PEX12O00623 359 aa12.26□□□□□ -0.45
RPSA-208ENST00000487876 ZGLP1P0C6A0 271 aa12.26□□□□□ -0.45
RPSA-208ENST00000487876 CCDC166P0CW27 439 aa12.26□□□□□ -0.45
RPSA-208ENST00000487876 NCF1P14598 390 aaPredicted RBP12.26□□□□□ -0.45
RPSA-208ENST00000487876 MMP11P24347 488 aa12.26□□□□□ -0.45
RPSA-208ENST00000487876 HRH2P25021 359 aa12.26□□□□□ -0.45
RPSA-208ENST00000487876 STX2P32856 288 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms