RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PRAMEF9Q5VWM5 478 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 GOLGA7Q7Z5G4 137 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 OR1L3Q8NH93 324 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 ZNF483Q8TF39 744 aaPredicted RBP18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 PTCD3Q96EY7 689 aaKnown RBP18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 ATP6V1G3Q96LB4 118 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 TMEM237Q96Q45 408 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 SELENOSQ9BQE4 189 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 AIF1LQ9BQI0 150 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 ACBD3Q9H3P7 528 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 NT5DC2Q9H857 520 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 ZBTB26Q9HCK0 441 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 ASCL3Q9NQ33 180 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 ZNF446Q9NWS9 450 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 B3GALT1Q9Y5Z6 326 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 AK5Q9Y6K8 562 aa18.55■□□□□ 0.56
PCOLCE-208ENST00000487172 SPTBN2O15020 2390 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 TRBC2A0A5B9 178 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 UGDHO60701 494 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 ZWINTO95229 277 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 IRF8Q02556 426 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 CHIT1Q13231 466 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 LAPTM5Q13571 262 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 PCLAFQ15004 111 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 DEFB110Q30KQ9 67 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 XKR6Q5GH73 641 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 FRMPD2BQ6IN97 320 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 GPR135Q8IZ08 494 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 TBC1D19Q8N5T2 526 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 GOLGA6L1Q8N7Z2 621 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 ZNF578Q96N58 590 aaPredicted RBP18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 CTRCQ99895 268 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 EFCAB11Q9BUY7 163 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 NTMT1Q9BV86 223 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 SPRY4Q9C004 299 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 IPPKQ9H8X2 491 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 DKK4Q9UBT3 224 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 ACSL6Q9UKU0 697 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 PCDHGA4Q9Y5G9 962 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 AP1M2Q9Y6Q5 423 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 SPEGQ15772 3267 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 MDC1Q14676 2089 aaKnown RBP18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 CACNA1AO00555 2505 aa18.54■□□□□ 0.56
PCOLCE-208ENST00000487172 H0YGG7 62 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 ATP8B1O43520 1251 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 LCMT2O60294 686 aaKnown RBP18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 BRINP1O60477 761 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 OR2B3O76000 313 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 SUPT7LO94864 414 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 VARSP26640 1264 aaKnown RBP18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 CD82P27701 267 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 SCTRP47872 440 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 ARF3P61204 181 aaPredicted RBP18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 DOC2AQ14183 400 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 PAGE2BQ5JRK9 111 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 LIPMQ5VYY2 423 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 LIPJQ5W064 366 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 TLDC1Q6P9B6 456 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 PLD3Q8IV08 490 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 KRT78Q8N1N4 520 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 MFSD9Q8NBP5 474 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 PPP4R1Q8TF05 950 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 GATA6Q92908 595 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 PMEPA1Q969W9 287 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 TM4SF19Q96DZ7 209 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 TMEM121BQ9BXQ6 578 aaPredicted RBP18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 SPNS1Q9H2V7 528 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 NOL11Q9H8H0 719 aaKnown RBP18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 KCNK9Q9NPC2 374 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 THSD1Q9NS62 852 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 GEMIN8Q9NWZ8 242 aaKnown RBP18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 PCDHB3Q9Y5E6 796 aa18.53■□□□□ 0.56
PCOLCE-208ENST00000487172 LOC105369274A0A096LPK9 316 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 LOC102723532A0A0G2JNH3 316 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 FEZF1A0PJY2 475 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 FITM1A5D6W6 292 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 TXNDC9O14530 226 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 OR7A17O14581 309 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 OR1F1O43749 312 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 TRIM13O60858 407 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 DHRS4L1P0CG22 281 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 GSTM2P28161 218 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 SLC5A2P31639 672 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 AHRP35869 848 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 BCL6P41182 706 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 HNF4AP41235 474 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 GCGRP47871 477 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 EMP3P54852 163 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 MEF2AQ02078 507 aaPredicted RBP18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 CLCQ05315 142 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 ASPHQ12797 758 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 MPP2Q14168 576 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 SLBPQ14493 270 aaKnown RBP eCLIP18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 WASHC2DQ5SRD0 308 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 MANEAQ5SRI9 462 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 YOD1Q5VVQ6 348 aaPredicted RBP18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 PWWP2BQ6NUJ5 590 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 TMIGD1Q6UXZ0 262 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 C10orf107Q8IVU9 208 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 OR4N4Q8N0Y3 316 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms