RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CDH1P12830 882 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 HOXB6P17509 224 aaKnown RBP11.19□□□□□ -0.62
PRKCB-207ENST00000486868 DDX5P17844 614 aaKnown RBP11.19□□□□□ -0.62
PRKCB-207ENST00000486868 CD72P21854 359 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 RPL10P27635 214 aaKnown RBP11.19□□□□□ -0.62
PRKCB-207ENST00000486868 SHMT2P34897 504 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 KIR3DL1P43629 444 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 CLDN2P57739 230 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 RPS13P62277 151 aaKnown RBP11.19□□□□□ -0.62
PRKCB-207ENST00000486868 MAP7Q14244 749 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 KRT33BQ14525 404 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 MTX3Q5HYI7 312 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 SPANXN4Q5MJ08 99 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 C6orf10Q5SRN2 563 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 ANXA8L1Q5VT79 327 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 ICE2Q659A1 982 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 SLC2A7Q6PXP3 512 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 LRRC74BQ6ZQY2 392 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 Q6ZS52 159 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 Q6ZSR6 202 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 IKBIPQ70UQ0 350 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 R3HCC1LQ7Z5L2 792 aaKnown RBP11.19□□□□□ -0.62
PRKCB-207ENST00000486868 GPR180Q86V85 440 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 DHFR2Q86XF0 187 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 SYT12Q8IV01 421 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 UBALD2Q8IYN6 164 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 KIAA2013Q8IYS2 634 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 PGBD3Q8N328 593 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 CAMKK1Q8N5S9 505 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 LINC01555Q8NAE3 123 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 CADM4Q8NFZ8 388 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 OR52E4Q8NGH9 312 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 OR52E1Q8NGJ3 308 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.19□□□□□ -0.626e-6■■■□□ 15.1
PRKCB-207ENST00000486868 GPBAR1Q8TDU6 330 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 CLDN23Q96B33 292 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 SLC22A18Q96BI1 424 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 COQ8BQ96D53 544 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 ZNF764Q96H86 408 aaPredicted RBP11.19□□□□□ -0.62
PRKCB-207ENST00000486868 QRFPRQ96P65 431 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 IL17FQ96PD4 163 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 PHF12Q96QT6 1004 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 OR52E6Q96RD3 313 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 MTERF1Q99551 399 aaKnown RBP11.19□□□□□ -0.62
PRKCB-207ENST00000486868 EFHD1Q9BUP0 239 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 TMEM184CQ9NVA4 438 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 TAC3Q9UHF0 121 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 ATP6V1HQ9UI12 483 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 MCM8Q9UJA3 840 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 MOSPD1Q9UJG1 213 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 ADAM29Q9UKF5 820 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 C15orf41Q9Y2V0 281 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 ANKRD12Q6UB98 2062 aa11.19□□□□□ -0.62
PRKCB-207ENST00000486868 ZFC3H1O60293 1989 aaKnown RBP11.19□□□□□ -0.62
PRKCB-207ENST00000486868 PRSS51A0A1B0GVH4 220 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 TRBC2A0A5B9 178 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 TBX19O60806 448 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 CLEC3AO75596 197 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 RASGRP1O95267 797 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 F3P13726 295 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 HOXB9P17482 250 aaPredicted RBP11.18□□□□□ -0.62
PRKCB-207ENST00000486868 TACR1P25103 407 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 SLC7A1P30825 629 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 RPS9P46781 194 aaKnown RBP11.18□□□□□ -0.62
PRKCB-207ENST00000486868 GSK3BP49841 420 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 BLKP51451 505 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 DGKQP52824 942 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 RAE1P78406 368 aaKnown RBP11.18□□□□□ -0.62
PRKCB-207ENST00000486868 MLLT1Q03111 559 aaPredicted RBP11.18□□□□□ -0.62
PRKCB-207ENST00000486868 RELAQ04206 551 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 ILF3Q12906 894 aaKnown RBP eCLIP11.18□□□□□ -0.62
PRKCB-207ENST00000486868 ALG11Q2TAA5 492 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 RUNDC3AQ59EK9 446 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 DEPDC1Q5TB30 811 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 PAGE2Q7Z2X7 111 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 IQCHQ86VS3 1027 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 RBM12BQ8IXT5 1001 aaKnown RBP11.18□□□□□ -0.62
PRKCB-207ENST00000486868 PQLC1Q8N2U9 271 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 SPEM1Q8N4L4 309 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 TBC1D19Q8N5T2 526 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 KRTCAP2Q8N6L1 136 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 C1orf52Q8N6N3 182 aaKnown RBP11.18□□□□□ -0.62
PRKCB-207ENST00000486868 EFCAB3Q8N7B9 438 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 VPS37AQ8NEZ2 397 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 BHLHE22Q8NFJ8 381 aaPredicted RBP11.18□□□□□ -0.62
PRKCB-207ENST00000486868 OR2A1Q8NGT9 310 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 PDXPQ96GD0 296 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 LRGUKQ96M69 825 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 CCDC115Q96NT0 180 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 GUCD1Q96NT3 240 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 TSSK3Q96PN8 268 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 GSDMCQ9BYG8 508 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 ALG2Q9H553 416 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 C6orf106Q9H6K1 298 aaPredicted RBP11.18□□□□□ -0.62
PRKCB-207ENST00000486868 MYNNQ9NPC7 610 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 CD93Q9NPY3 652 aa11.18□□□□□ -0.62
PRKCB-207ENST00000486868 PRDM8Q9NQV8 689 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms